Analysis of interatomic Contacts of Structural Units in PDB entry:
2EH6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EH6 entry

There are 2 chains in PDB entry 2EH6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 1LEU 375
B
THR 1LEU 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2EH6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
34 39Right-handed alpha
Helix 2
2
A
46 60Right-handed alpha
Helix 3
3
A
69 82Right-handed alpha
Helix 4
4
A
94 113Right-handed alpha
Helix 5
5
A
131 138Right-handed alpha
Helix 6
6
A
140 144Right-handed 310
Helix 7
7
A
161 167Right-handed alpha
Helix 8
8
A
191 206Right-handed alpha
Helix 9
9
A
225 231Right-handed 310
Helix 10
10
A
240 245Right-handed 310
Helix 11
11
A
256 260Right-handed alpha
Helix 12
12
A
274 309Right-handed alpha
Helix 13
13
A
329 339Right-handed alpha
Helix 14
14
A
360 375Right-handed alpha
Helix 15
15
B
34 39Right-handed alpha
Helix 16
16
B
46 60Right-handed alpha
Helix 17
17
B
69 81Right-handed alpha
Helix 18
18
B
94 113Right-handed alpha
Helix 19
19
B
131 138Right-handed alpha
Helix 20
20
B
140 145Right-handed alpha
Helix 21
21
B
161 169Right-handed alpha
Helix 22
22
B
191 205Right-handed alpha
Helix 23
23
B
225 231Right-handed 310
Helix 24
24
B
240 245Right-handed 310
Helix 25
25
B
256 260Right-handed alpha
Helix 26
26
B
274 309Right-handed alpha
Helix 27
27
B
329 339Right-handed alpha
Helix 28
28
B
360 375Right-handed alpha
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There are 8 sheets in PDB entry 2EH6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
341 342first strand
Strand 2
A
29 32parallel
Strand 3
A
21 24anti-parallel
Strand 4
A
10 18anti-parallel
Strand 5
B
67 68parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
87 92first strand
Strand 2
A
250 255anti-parallel
Strand 3
A
236 239anti-parallel
Strand 4
A
208 212parallel
Strand 5
A
173 178parallel
Strand 6
A
119 123parallel
Strand 7
A
154 157parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
181 182first strand
Strand 2
A
188 189anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
313 317first strand
Strand 2
A
320 324anti-parallel
Strand 3
A
350 353anti-parallel
Strand 4
A
344 346anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
14 18first strand
Strand 2
B
21 24anti-parallel
Strand 3
B
29 32anti-parallel
Strand 4
B
341 342parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
87 92first strand
Strand 2
B
250 255anti-parallel
Strand 3
B
236 239anti-parallel
Strand 4
B
208 212parallel
Strand 5
B
173 178parallel
Strand 6
B
119 123parallel
Strand 7
B
154 157parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
181 182first strand
Strand 2
B
188 189anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
313 317first strand
Strand 2
B
320 324anti-parallel
Strand 3
B
350 353anti-parallel
Strand 4
B
344 346anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il