Analysis of interatomic Contacts of Structural Units in PDB entry:
2EIX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EIX entry

There are 2 chains in PDB entry 2EIX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 39PHE 281
B
 LYS 39PHE 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2EIX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
123 131Right-handed alpha
Helix 2
2
A
165 178Right-handed alpha
Helix 3
3
A
196 198Right-handed 310
Helix 4
4
A
200 211Right-handed alpha
Helix 5
5
A
235 243Right-handed alpha
Helix 6
6
A
257 272Right-handed alpha
Helix 7
7
A
274 276Right-handed 310
Helix 8
8
B
123 131Right-handed alpha
Helix 9
9
B
165 179Right-handed alpha
Helix 10
10
B
196 198Right-handed 310
Helix 11
11
B
200 211Right-handed alpha
Helix 12
12
B
235 243Right-handed alpha
Helix 13
13
B
257 272Right-handed alpha
Helix 14
14
B
274 276Right-handed 310
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There are 4 sheets in PDB entry 2EIX. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 101first strand
Strand 2
A
85 92anti-parallel
Strand 3
A
137 144anti-parallel
Strand 4
A
50 61anti-parallel
Strand 5
A
64 70anti-parallel
Strand 6
A
112 118anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
214 222parallel
Strand 3
A
185 194parallel
Strand 4
A
156 162parallel
Strand 5
A
250 255parallel
Strand 6
A
278 280parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 101first strand
Strand 2
B
85 92anti-parallel
Strand 3
B
137 144anti-parallel
Strand 4
B
50 61anti-parallel
Strand 5
B
64 70anti-parallel
Strand 6
B
112 118anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 231first strand
Strand 2
B
214 222parallel
Strand 3
B
185 194parallel
Strand 4
B
156 162parallel
Strand 5
B
250 255parallel
Strand 6
B
278 280parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il