Analysis of interatomic Contacts of Structural Units in PDB entry:
2EJA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EJA entry

There are 2 chains in PDB entry 2EJA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2THR 338
B
 PRO 2LEU 337
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 2EJA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 12Right-handed alpha
Helix 2
2
A
31 39Right-handed alpha
Helix 3
3
A
43 50Right-handed alpha
Helix 4
4
A
50 66Right-handed alpha
Helix 5
5
A
77 84Right-handed 310
Helix 6
6
A
102 106Right-handed 310
Helix 7
7
A
110 113Right-handed 310
Helix 8
8
A
114 128Right-handed alpha
Helix 9
9
A
139 150Right-handed alpha
Helix 10
10
A
156 166Right-handed alpha
Helix 11
11
A
166 191Right-handed alpha
Helix 12
12
A
202 206Right-handed 310
Helix 13
13
A
207 215Right-handed alpha
Helix 14
14
A
215 230Right-handed alpha
Helix 15
15
A
240 249Right-handed alpha
Helix 16
16
A
263 271Right-handed alpha
Helix 17
17
A
280 286Right-handed 310
Helix 18
18
A
287 300Right-handed alpha
Helix 19
19
A
321 334Right-handed alpha
Helix 20
20
B
5 12Right-handed alpha
Helix 21
21
B
31 39Right-handed alpha
Helix 22
22
B
43 50Right-handed alpha
Helix 23
23
B
50 66Right-handed alpha
Helix 24
24
B
77 84Right-handed 310
Helix 25
25
B
102 106Right-handed 310
Helix 26
26
B
110 113Right-handed 310
Helix 27
27
B
114 128Right-handed alpha
Helix 28
28
B
139 149Right-handed alpha
Helix 29
29
B
156 166Right-handed alpha
Helix 30
30
B
166 191Right-handed alpha
Helix 31
31
B
202 206Right-handed 310
Helix 32
32
B
207 215Right-handed alpha
Helix 33
33
B
215 230Right-handed alpha
Helix 34
34
B
240 249Right-handed alpha
Helix 35
35
B
263 271Right-handed alpha
Helix 36
36
B
280 286Right-handed 310
Helix 37
37
B
287 300Right-handed alpha
Helix 38
38
B
321 334Right-handed alpha
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There are 4 sheets in PDB entry 2EJA. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
133 138parallel
Strand 3
A
195 200parallel
Strand 4
A
234 238parallel
Strand 5
A
255 257parallel
Strand 6
A
274 276parallel
Strand 7
A
308 309parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 90first strand
Strand 2
A
94 98anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 71first strand
Strand 2
B
133 138parallel
Strand 3
B
195 200parallel
Strand 4
B
234 238parallel
Strand 5
B
255 257parallel
Strand 6
B
275 276parallel
Strand 7
B
308 309parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 90first strand
Strand 2
B
94 98anti-parallel
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