Analysis of interatomic Contacts of Structural Units in PDB entry:
2EJC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EJC entry

There is 1 chain in PDB entry 2EJC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2EJC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 20Right-handed alpha
Helix 2
2
A
34 48Right-handed alpha
Helix 3
3
A
58 62Right-handed 310
Helix 4
4
A
67 71Right-handed 310
Helix 5
5
A
74 84Right-handed alpha
Helix 6
6
A
94 99Right-handed alpha
Helix 7
7
A
111 115Right-handed 310
Helix 8
8
A
117 121Right-handed 310
Helix 9
9
A
123 140Right-handed alpha
Helix 10
10
A
150 164Right-handed alpha
Helix 11
11
A
185 191Right-handed 310
Helix 12
12
A
192 199Right-handed alpha
Helix 13
13
A
200 215Right-handed alpha
Helix 14
14
A
219 233Right-handed alpha
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There are 2 sheets in PDB entry 2EJC. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
A
89 91parallel
Strand 3
A
50 55parallel
Strand 4
A
24 29parallel
Strand 5
A
143 147parallel
Strand 6
A
169 173parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 246first strand
Strand 2
A
260 268anti-parallel
Strand 3
A
271 279anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il