Analysis of interatomic Contacts of Structural Units in PDB entry:
2EO5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EO5 entry

There is 1 chain in PDB entry 2EO5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2EO5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 14Right-handed alpha
Helix 2
2
A
48 53Right-handed 310
Helix 3
3
A
61 73Right-handed alpha
Helix 4
4
A
85 99Right-handed alpha
Helix 5
5
A
112 126Right-handed alpha
Helix 6
6
A
143 150Right-handed alpha
Helix 7
7
A
153 158Right-handed 310
Helix 8
8
A
187 202Right-handed alpha
Helix 9
9
A
202 207Right-handed alpha
Helix 10
10
A
209 211Right-handed 310
Helix 11
11
A
233 245Right-handed alpha
Helix 12
12
A
265 271Right-handed 310
Helix 13
13
A
280 285Right-handed 310
Helix 14
14
A
298 300Right-handed 310
Helix 15
15
A
313 346Right-handed alpha
Helix 16
16
A
365 379Right-handed alpha
Helix 17
17
A
400 418Right-handed alpha
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There are 3 sheets in PDB entry 2EO5. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
35 38anti-parallel
Strand 3
A
43 46anti-parallel
Strand 4
A
381 382parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 110first strand
Strand 2
A
291 296anti-parallel
Strand 3
A
276 279anti-parallel
Strand 4
A
248 252parallel
Strand 5
A
213 218parallel
Strand 6
A
131 135parallel
Strand 7
A
167 170parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 355first strand
Strand 2
A
358 362anti-parallel
Strand 3
A
390 393anti-parallel
Strand 4
A
384 386anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il