Analysis of interatomic Contacts of Structural Units in PDB entry:
2EUI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EUI entry

There are 4 chains in PDB entry 2EUI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1SER 153
B
 MSE 1ASP 150
D
 MSE 1SER 153
E
 MSE 1GLU 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2EUI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 9Right-handed 310
Helix 2
2
A
10 25Right-handed alpha
Helix 3
3
A
30 45Right-handed alpha
Helix 4
4
A
91 110Right-handed alpha
Helix 5
5
A
123 132Right-handed alpha
Helix 6
6
B
7 9Right-handed 310
Helix 7
7
B
10 25Right-handed alpha
Helix 8
8
B
30 45Right-handed alpha
Helix 9
9
B
93 110Right-handed alpha
Helix 10
10
B
123 132Right-handed alpha
Helix 11
11
D
10 25Right-handed alpha
Helix 12
12
D
30 44Right-handed alpha
Helix 13
13
D
88 91Right-handed 310
Helix 14
14
D
94 110Right-handed alpha
Helix 15
15
D
123 133Right-handed alpha
Helix 16
16
E
7 9Right-handed 310
Helix 17
17
E
10 25Right-handed alpha
Helix 18
18
E
30 44Right-handed alpha
Helix 19
19
E
91 110Right-handed alpha
Helix 20
20
E
123 133Right-handed alpha
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There are 4 sheets in PDB entry 2EUI. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
48 53anti-parallel
Strand 3
A
60 71anti-parallel
Strand 4
A
76 86anti-parallel
Strand 5
A
112 120parallel
Strand 6
B
141 147anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 5first strand
Strand 2
B
48 53anti-parallel
Strand 3
B
60 71anti-parallel
Strand 4
B
76 86anti-parallel
Strand 5
B
112 117parallel
Strand 6
A
144 147anti-parallel
Strand 7
B
136 137anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 5first strand
Strand 2
D
48 53anti-parallel
Strand 3
D
60 71anti-parallel
Strand 4
D
76 86anti-parallel
Strand 5
D
114 120parallel
Strand 6
E
141 147anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 5first strand
Strand 2
E
48 53anti-parallel
Strand 3
E
60 71anti-parallel
Strand 4
E
76 86anti-parallel
Strand 5
E
114 120parallel
Strand 6
D
141 147anti-parallel
Strand 7
E
136 137anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il