Analysis of interatomic Contacts of Structural Units in PDB entry:
2EVV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EVV entry

There are 4 chains in PDB entry 2EVV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1VAL 181
B
 MSE 1ARG 182
C
 MSE 1VAL 181
D
 MSE 1PHE 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2EVV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 21Right-handed 310
Helix 2
2
A
25 29Right-handed 310
Helix 3
3
A
60 66Right-handed alpha
Helix 4
4
A
85 90Right-handed alpha
Helix 5
5
A
110 121Right-handed alpha
Helix 6
6
A
155 164Right-handed alpha
Helix 7
7
B
17 21Right-handed 310
Helix 8
8
B
25 29Right-handed 310
Helix 9
9
B
60 66Right-handed alpha
Helix 10
10
B
85 90Right-handed alpha
Helix 11
11
B
110 121Right-handed alpha
Helix 12
12
B
155 164Right-handed alpha
Helix 13
13
C
17 21Right-handed 310
Helix 14
14
C
25 29Right-handed 310
Helix 15
15
C
60 66Right-handed alpha
Helix 16
16
C
85 90Right-handed alpha
Helix 17
17
C
110 121Right-handed alpha
Helix 18
18
C
155 164Right-handed alpha
Helix 19
19
D
17 21Right-handed 310
Helix 20
20
D
25 29Right-handed 310
Helix 21
21
D
61 66Right-handed alpha
Helix 22
22
D
85 90Right-handed alpha
Helix 23
23
D
110 121Right-handed alpha
Helix 24
24
D
155 164Right-handed alpha
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There are 7 sheets in PDB entry 2EVV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
167 177parallel
Strand 3
A
134 143anti-parallel
Strand 4
A
51 58anti-parallel
Strand 5
A
69 77anti-parallel
Strand 6
A
94 95anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
41 43anti-parallel
Strand 3
A
81 82anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 4first strand
Strand 2
B
167 177parallel
Strand 3
B
134 143anti-parallel
Strand 4
B
51 58anti-parallel
Strand 5
B
69 77anti-parallel
Strand 6
B
94 95anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 7first strand
Strand 2
B
41 43anti-parallel
Strand 3
B
81 82anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 82first strand
Strand 2
C
41 43anti-parallel
Strand 3
C
2 7anti-parallel
Strand 4
C
167 177parallel
Strand 5
C
134 143anti-parallel
Strand 6
C
51 58anti-parallel
Strand 7
C
69 77anti-parallel
Strand 8
C
94 95anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 3first strand
Strand 2
D
167 177parallel
Strand 3
D
134 143anti-parallel
Strand 4
D
51 58anti-parallel
Strand 5
D
69 77anti-parallel
Strand 6
D
94 95anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 7first strand
Strand 2
D
41 43anti-parallel
Strand 3
D
81 82anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il