Analysis of interatomic Contacts of Structural Units in PDB entry:
2EX3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2EX3 entry

There are 12 chains in PDB entry 2EX3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 6	LYS 575
B	UNK 1	PHE 259
C	ARG 6	LYS 575
D	UNK 1	PHE 259
E	ARG 6	LYS 575
F	UNK 1	PHE 259
G	ARG 6	LYS 575
H	UNK 1	PHE 259
I	ARG 6	LYS 575
J	UNK 1	PHE 259
K	ARG 6	LYS 575
L	UNK 1	PHE 259

There are159 helices in PDB entry 2EX3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	43	55	Right-handed alpha
Helix 2	2	A	62	77	Right-handed alpha
Helix 3	3	A	122	126	Right-handed alpha
Helix 4	4	A	129	138	Right-handed alpha
Helix 5	5	A	159	182	Right-handed alpha
Helix 6	6	A	189	203	Right-handed alpha
Helix 7	7	A	203	211	Right-handed alpha
Helix 8	8	A	215	224	Right-handed alpha
Helix 9	9	A	235	238	Right-handed 310
Helix 10	10	A	252	261	Right-handed alpha
Helix 11	11	A	330	339	Right-handed alpha
Helix 12	12	A	360	374	Right-handed alpha
Helix 13	13	A	376	389	Right-handed alpha
Helix 14	14	A	390	394	Right-handed 310
Helix 15	15	A	426	448	Right-handed alpha
Helix 16	16	A	468	473	Right-handed alpha
Helix 17	17	A	534	539	Right-handed alpha
Helix 18	18	B	4	10	Right-handed alpha
Helix 19	19	B	27	41	Right-handed alpha
Helix 20	20	B	88	113	Right-handed alpha
Helix 21	21	B	114	119	Right-handed alpha
Helix 22	22	B	149	153	Right-handed 310
Helix 23	23	B	155	169	Right-handed alpha
Helix 24	24	B	173	195	Right-handed alpha
Helix 25	25	B	197	209	Right-handed alpha
Helix 26	26	B	211	223	Right-handed alpha
Helix 27	27	B	236	256	Right-handed alpha
Helix 28	28	C	43	55	Right-handed alpha
Helix 29	29	C	62	77	Right-handed alpha
Helix 30	30	C	123	125	Right-handed 310
Helix 31	31	C	129	137	Right-handed alpha
Helix 32	32	C	159	183	Right-handed alpha
Helix 33	33	C	189	203	Right-handed alpha
Helix 34	34	C	203	211	Right-handed alpha
Helix 35	35	C	215	224	Right-handed alpha
Helix 36	36	C	235	238	Right-handed 310
Helix 37	37	C	252	261	Right-handed alpha
Helix 38	38	C	330	339	Right-handed alpha
Helix 39	39	C	360	374	Right-handed alpha
Helix 40	40	C	375	389	Right-handed alpha
Helix 41	41	C	390	393	Right-handed 310
Helix 42	42	C	426	448	Right-handed alpha
Helix 43	43	C	468	473	Right-handed alpha
Helix 44	44	C	534	539	Right-handed alpha
Helix 45	45	D	4	9	Right-handed alpha
Helix 46	46	D	27	42	Right-handed alpha
Helix 47	47	D	88	119	Right-handed alpha
Helix 48	48	D	149	153	Right-handed 310
Helix 49	49	D	155	169	Right-handed alpha
Helix 50	50	D	173	195	Right-handed alpha
Helix 51	51	D	197	209	Right-handed alpha
Helix 52	52	D	211	223	Right-handed alpha
Helix 53	53	D	236	256	Right-handed alpha
Helix 54	54	E	43	55	Right-handed alpha
Helix 55	55	E	62	77	Right-handed alpha
Helix 56	56	E	123	125	Right-handed 310
Helix 57	57	E	129	137	Right-handed alpha
Helix 58	58	E	159	182	Right-handed alpha
Helix 59	59	E	189	203	Right-handed alpha
Helix 60	60	E	203	211	Right-handed alpha
Helix 61	61	E	215	223	Right-handed alpha
Helix 62	62	E	224	226	Right-handed 310
Helix 63	63	E	235	238	Right-handed 310
Helix 64	64	E	252	261	Right-handed alpha
Helix 65	65	E	330	339	Right-handed alpha
Helix 66	66	E	360	374	Right-handed alpha
Helix 67	67	E	376	394	Right-handed alpha
Helix 68	68	E	426	448	Right-handed alpha
Helix 69	69	E	468	473	Right-handed alpha
Helix 70	70	E	534	539	Right-handed alpha
Helix 71	71	F	4	10	Right-handed alpha
Helix 72	72	F	27	41	Right-handed alpha
Helix 73	73	F	88	119	Right-handed alpha
Helix 74	74	F	149	153	Right-handed 310
Helix 75	75	F	155	169	Right-handed alpha
Helix 76	76	F	173	195	Right-handed alpha
Helix 77	77	F	197	209	Right-handed alpha
Helix 78	78	F	211	223	Right-handed alpha
Helix 79	79	F	236	256	Right-handed alpha
Helix 80	80	G	43	55	Right-handed alpha
Helix 81	81	G	62	75	Right-handed alpha
Helix 82	82	G	129	137	Right-handed alpha
Helix 83	83	G	159	182	Right-handed alpha
Helix 84	84	G	189	203	Right-handed alpha
Helix 85	85	G	203	211	Right-handed alpha
Helix 86	86	G	215	224	Right-handed alpha
Helix 87	87	G	235	238	Right-handed 310
Helix 88	88	G	252	261	Right-handed alpha
Helix 89	89	G	330	339	Right-handed alpha
Helix 90	90	G	360	374	Right-handed alpha
Helix 91	91	G	376	394	Right-handed alpha
Helix 92	92	G	426	448	Right-handed alpha
Helix 93	93	G	468	473	Right-handed alpha
Helix 94	94	G	534	539	Right-handed alpha
Helix 95	95	H	4	10	Right-handed alpha
Helix 96	96	H	27	41	Right-handed alpha
Helix 97	97	H	72	75	Right-handed 310
Helix 98	98	H	88	113	Right-handed alpha
Helix 99	99	H	114	119	Right-handed alpha
Helix 100	100	H	149	153	Right-handed 310
Helix 101	101	H	155	169	Right-handed alpha
Helix 102	102	H	173	195	Right-handed alpha
Helix 103	103	H	197	209	Right-handed alpha
Helix 104	104	H	211	223	Right-handed alpha
Helix 105	105	H	236	256	Right-handed alpha
Helix 106	106	I	43	55	Right-handed alpha
Helix 107	107	I	62	77	Right-handed alpha
Helix 108	108	I	122	126	Right-handed alpha
Helix 109	109	I	129	137	Right-handed alpha
Helix 110	110	I	159	182	Right-handed alpha
Helix 111	111	I	189	203	Right-handed alpha
Helix 112	112	I	203	211	Right-handed alpha
Helix 113	113	I	215	223	Right-handed alpha
Helix 114	114	I	224	226	Right-handed 310
Helix 115	115	I	235	238	Right-handed 310
Helix 116	116	I	252	261	Right-handed alpha
Helix 117	117	I	330	339	Right-handed alpha
Helix 118	118	I	360	374	Right-handed alpha
Helix 119	119	I	375	388	Right-handed alpha
Helix 120	120	I	388	394	Right-handed alpha
Helix 121	121	I	426	448	Right-handed alpha
Helix 122	122	I	468	473	Right-handed alpha
Helix 123	123	I	534	539	Right-handed alpha
Helix 124	124	J	2	10	Right-handed alpha
Helix 125	125	J	27	42	Right-handed alpha
Helix 126	126	J	88	119	Right-handed alpha
Helix 127	127	J	149	153	Right-handed 310
Helix 128	128	J	155	169	Right-handed alpha
Helix 129	129	J	173	195	Right-handed alpha
Helix 130	130	J	197	209	Right-handed alpha
Helix 131	131	J	211	223	Right-handed alpha
Helix 132	132	J	236	256	Right-handed alpha
Helix 133	133	K	43	55	Right-handed alpha
Helix 134	134	K	62	77	Right-handed alpha
Helix 135	135	K	122	126	Right-handed alpha
Helix 136	136	K	129	137	Right-handed alpha
Helix 137	137	K	159	182	Right-handed alpha
Helix 138	138	K	189	203	Right-handed alpha
Helix 139	139	K	203	211	Right-handed alpha
Helix 140	140	K	215	223	Right-handed alpha
Helix 141	141	K	224	226	Right-handed 310
Helix 142	142	K	235	238	Right-handed 310
Helix 143	143	K	252	261	Right-handed alpha
Helix 144	144	K	330	339	Right-handed alpha
Helix 145	145	K	360	374	Right-handed alpha
Helix 146	146	K	376	389	Right-handed alpha
Helix 147	147	K	390	393	Right-handed 310
Helix 148	148	K	426	448	Right-handed alpha
Helix 149	149	K	468	473	Right-handed alpha
Helix 150	150	K	534	539	Right-handed alpha
Helix 151	151	L	4	10	Right-handed alpha
Helix 152	152	L	27	41	Right-handed alpha
Helix 153	153	L	88	118	Right-handed alpha
Helix 154	154	L	149	153	Right-handed 310
Helix 155	155	L	155	169	Right-handed alpha
Helix 156	156	L	173	195	Right-handed alpha
Helix 157	157	L	197	209	Right-handed alpha
Helix 158	158	L	211	224	Right-handed alpha
Helix 159	159	L	236	256	Right-handed alpha

There are 42 sheets in PDB entry 2EX3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	41	first strand
Strand 2	A	24	31	anti-parallel
Strand 3	A	8	15	anti-parallel
Strand 4	A	57	60	parallel
Strand 5	A	113	121	parallel
Strand 6	A	100	110	anti-parallel
Strand 7	A	89	94	anti-parallel
Strand 8	A	80	81	parallel

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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	233	first strand
Strand 2	A	452	456	anti-parallel
Strand 3	A	459	463	anti-parallel
Strand 4	A	245	250	anti-parallel
Strand 5	A	483	496	anti-parallel
Strand 6	A	499	508	anti-parallel
Strand 7	A	513	515	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	242	first strand
Strand 2	A	483	496	anti-parallel
Strand 3	A	499	508	anti-parallel
Strand 4	A	523	530	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	272	first strand
Strand 2	A	340	356	anti-parallel
Strand 3	A	283	294	anti-parallel
Strand 4	A	324	329	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	406	first strand
Strand 2	A	412	416	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	551	561	first strand
Strand 2	A	564	573	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	79	first strand
Strand 2	B	85	87	anti-parallel

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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	41	first strand
Strand 2	C	24	31	anti-parallel
Strand 3	C	8	15	anti-parallel
Strand 4	C	57	60	parallel
Strand 5	C	113	121	parallel
Strand 6	C	100	110	anti-parallel
Strand 7	C	89	94	anti-parallel
Strand 8	C	80	81	parallel

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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	231	233	first strand
Strand 2	C	452	456	anti-parallel
Strand 3	C	459	463	anti-parallel
Strand 4	C	245	250	anti-parallel
Strand 5	C	483	496	anti-parallel
Strand 6	C	499	508	anti-parallel
Strand 7	C	513	515	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	242	first strand
Strand 2	C	483	496	anti-parallel
Strand 3	C	499	508	anti-parallel
Strand 4	C	523	529	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	263	272	first strand
Strand 2	C	340	356	anti-parallel
Strand 3	C	283	294	anti-parallel
Strand 4	C	324	329	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	402	406	first strand
Strand 2	C	412	416	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	551	561	first strand
Strand 2	C	564	573	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	79	first strand
Strand 2	D	85	87	anti-parallel

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There are 8 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	41	first strand
Strand 2	E	24	31	anti-parallel
Strand 3	E	8	15	anti-parallel
Strand 4	E	57	60	parallel
Strand 5	E	113	121	parallel
Strand 6	E	100	110	anti-parallel
Strand 7	E	89	94	anti-parallel
Strand 8	E	80	81	parallel

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There are 7 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	231	233	first strand
Strand 2	E	452	456	anti-parallel
Strand 3	E	459	463	anti-parallel
Strand 4	E	245	250	anti-parallel
Strand 5	E	483	496	anti-parallel
Strand 6	E	499	508	anti-parallel
Strand 7	E	513	515	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	241	242	first strand
Strand 2	E	483	496	anti-parallel
Strand 3	E	499	508	anti-parallel
Strand 4	E	523	529	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	263	272	first strand
Strand 2	E	340	356	anti-parallel
Strand 3	E	283	294	anti-parallel
Strand 4	E	324	329	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	402	406	first strand
Strand 2	E	412	416	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	551	561	first strand
Strand 2	E	564	573	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	77	79	first strand
Strand 2	F	85	87	anti-parallel

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There are 8 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	38	41	first strand
Strand 2	G	24	31	anti-parallel
Strand 3	G	8	15	anti-parallel
Strand 4	G	57	60	parallel
Strand 5	G	113	121	parallel
Strand 6	G	100	110	anti-parallel
Strand 7	G	89	94	anti-parallel
Strand 8	G	80	81	parallel

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There are 7 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	231	233	first strand
Strand 2	G	452	456	anti-parallel
Strand 3	G	459	463	anti-parallel
Strand 4	G	245	250	anti-parallel
Strand 5	G	483	496	anti-parallel
Strand 6	G	499	508	anti-parallel
Strand 7	G	513	515	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	241	242	first strand
Strand 2	G	483	496	anti-parallel
Strand 3	G	499	508	anti-parallel
Strand 4	G	523	529	anti-parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	263	272	first strand
Strand 2	G	340	356	anti-parallel
Strand 3	G	283	294	anti-parallel
Strand 4	G	324	329	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	402	406	first strand
Strand 2	G	412	416	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	551	561	first strand
Strand 2	G	564	573	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	77	79	first strand
Strand 2	H	85	87	anti-parallel

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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	38	41	first strand
Strand 2	I	24	31	anti-parallel
Strand 3	I	8	15	anti-parallel
Strand 4	I	57	60	parallel
Strand 5	I	113	121	parallel
Strand 6	I	100	110	anti-parallel
Strand 7	I	89	94	anti-parallel
Strand 8	I	80	81	parallel

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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	231	233	first strand
Strand 2	I	452	456	anti-parallel
Strand 3	I	459	463	anti-parallel
Strand 4	I	245	250	anti-parallel
Strand 5	I	483	496	anti-parallel
Strand 6	I	499	508	anti-parallel
Strand 7	I	513	515	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	241	242	first strand
Strand 2	I	483	496	anti-parallel
Strand 3	I	499	508	anti-parallel
Strand 4	I	523	529	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	263	272	first strand
Strand 2	I	340	356	anti-parallel
Strand 3	I	283	294	anti-parallel
Strand 4	I	324	329	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	402	406	first strand
Strand 2	I	412	416	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	551	561	first strand
Strand 2	I	564	573	anti-parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	77	79	first strand
Strand 2	J	85	87	anti-parallel

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There are 8 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	34	41	first strand
Strand 2	K	24	31	anti-parallel
Strand 3	K	8	15	anti-parallel
Strand 4	K	57	60	parallel
Strand 5	K	113	121	parallel
Strand 6	K	100	110	anti-parallel
Strand 7	K	89	94	anti-parallel
Strand 8	K	80	81	parallel

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There are 7 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	231	233	first strand
Strand 2	K	452	456	anti-parallel
Strand 3	K	459	463	anti-parallel
Strand 4	K	245	250	anti-parallel
Strand 5	K	483	496	anti-parallel
Strand 6	K	499	508	anti-parallel
Strand 7	K	513	515	anti-parallel

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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	241	242	first strand
Strand 2	K	483	496	anti-parallel
Strand 3	K	499	508	anti-parallel
Strand 4	K	523	529	anti-parallel

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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	263	272	first strand
Strand 2	K	340	356	anti-parallel
Strand 3	K	283	294	anti-parallel
Strand 4	K	324	329	anti-parallel

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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	402	406	first strand
Strand 2	K	412	416	anti-parallel

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There are 2 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	551	561	first strand
Strand 2	K	564	573	anti-parallel

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There are 2 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	77	79	first strand
Strand 2	L	85	87	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2EX3

Analysis of interatomic Contacts of Structural Units in PDB entry:
2EX3