Analysis of interatomic Contacts of Structural Units in PDB entry:
2EZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EZV entry

There are 4 chains in PDB entry 2EZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
F
 T 4 T 18
G
 A 24 A 38
A
 MET 1ARG 269
B
 MET 1ARG 269
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2EZV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 8Right-handed 310
Helix 2
2
A
9 42Right-handed alpha
Helix 3
3
A
48 63Right-handed alpha
Helix 4
4
A
113 117Right-handed 310
Helix 5
5
A
188 190Right-handed 310
Helix 6
6
A
191 196Right-handed alpha
Helix 7
7
A
222 230Right-handed alpha
Helix 8
8
B
4 8Right-handed 310
Helix 9
9
B
9 42Right-handed alpha
Helix 10
10
B
48 63Right-handed alpha
Helix 11
11
B
64 66Right-handed 310
Helix 12
12
B
188 190Right-handed 310
Helix 13
13
B
191 196Right-handed alpha
Helix 14
14
B
222 230Right-handed alpha
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There are 10 sheets in PDB entry 2EZV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 86first strand
Strand 2
A
93 104anti-parallel
Strand 3
A
151 167parallel
Strand 4
A
141 145anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 86first strand
Strand 2
A
93 104anti-parallel
Strand 3
A
151 167parallel
Strand 4
A
176 186anti-parallel
Strand 5
A
234 238anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
219 221anti-parallel
Strand 3
A
204 206anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 124first strand
Strand 2
A
131 134anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 253first strand
Strand 2
A
259 263anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 86first strand
Strand 2
B
93 104anti-parallel
Strand 3
B
151 167parallel
Strand 4
B
141 145anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 86first strand
Strand 2
B
93 104anti-parallel
Strand 3
B
151 167parallel
Strand 4
B
176 186anti-parallel
Strand 5
B
234 238anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 112first strand
Strand 2
B
219 221anti-parallel
Strand 3
B
204 206anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 124first strand
Strand 2
B
131 134anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 253first strand
Strand 2
B
259 263anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il