Analysis of interatomic Contacts of Structural Units in PDB entry:
2F00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F00 entry

There are 2 chains in PDB entry 2F00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLN 483
B
 MSE 1GLN 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 2F00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 10Right-handed alpha
Helix 2
2
A
31 42Right-handed alpha
Helix 3
3
A
54 63Right-handed alpha
Helix 4
4
A
72 77Right-handed 310
Helix 5
5
A
92 101Right-handed alpha
Helix 6
6
A
108 117Right-handed alpha
Helix 7
7
A
129 144Right-handed alpha
Helix 8
8
A
180 185Right-handed 310
Helix 9
9
A
199 203Right-handed 310
Helix 10
10
A
206 219Right-handed alpha
Helix 11
11
A
233 240Right-handed alpha
Helix 12
12
A
241 243Right-handed 310
Helix 13
13
A
290 308Right-handed alpha
Helix 14
14
A
310 320Right-handed alpha
Helix 15
15
A
355 368Right-handed alpha
Helix 16
16
A
383 388Right-handed alpha
Helix 17
17
A
390 399Right-handed alpha
Helix 18
18
A
421 426Right-handed alpha
Helix 19
19
A
446 451Right-handed alpha
Helix 20
20
A
452 454Right-handed 310
Helix 21
21
A
467 478Right-handed alpha
Helix 22
22
B
2 13Right-handed alpha
Helix 23
23
B
31 42Right-handed alpha
Helix 24
24
B
54 63Right-handed alpha
Helix 25
25
B
72 77Right-handed 310
Helix 26
26
B
92 101Right-handed alpha
Helix 27
27
B
108 118Right-handed alpha
Helix 28
28
B
129 144Right-handed alpha
Helix 29
29
B
180 185Right-handed 310
Helix 30
30
B
199 204Right-handed 310
Helix 31
31
B
206 219Right-handed alpha
Helix 32
32
B
233 240Right-handed alpha
Helix 33
33
B
241 243Right-handed 310
Helix 34
34
B
290 308Right-handed alpha
Helix 35
35
B
310 320Right-handed alpha
Helix 36
36
B
336 341Right-handed alpha
Helix 37
37
B
355 370Right-handed alpha
Helix 38
38
B
383 390Right-handed alpha
Helix 39
39
B
390 399Right-handed alpha
Helix 40
40
B
421 432Right-handed alpha
Helix 41
41
B
445 454Right-handed alpha
Helix 42
42
B
467 478Right-handed alpha
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There are 6 sheets in PDB entry 2F00. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 68first strand
Strand 2
A
45 49parallel
Strand 3
A
21 25parallel
Strand 4
A
81 84parallel
Strand 5
A
105 107parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 164first strand
Strand 2
A
149 151anti-parallel
Strand 3
A
170 174parallel
Strand 4
A
120 125parallel
Strand 5
A
189 192parallel
Strand 6
A
226 230parallel
Strand 7
A
246 251parallel
Strand 8
A
258 266parallel
Strand 9
A
269 275anti-parallel
Strand 10
A
282 286anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 335first strand
Strand 2
A
345 351anti-parallel
Strand 3
A
457 463parallel
Strand 4
A
374 379parallel
Strand 5
A
403 406parallel
Strand 6
A
438 439parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
45 49parallel
Strand 3
B
21 25parallel
Strand 4
B
81 84parallel
Strand 5
B
105 107parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 164first strand
Strand 2
B
149 151anti-parallel
Strand 3
B
170 174parallel
Strand 4
B
120 125parallel
Strand 5
B
189 192parallel
Strand 6
B
226 230parallel
Strand 7
B
246 251parallel
Strand 8
B
258 266parallel
Strand 9
B
269 275anti-parallel
Strand 10
B
282 286anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 335first strand
Strand 2
B
345 351anti-parallel
Strand 3
B
457 463parallel
Strand 4
B
374 379parallel
Strand 5
B
403 407parallel
Strand 6
B
438 440parallel
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