Analysis of interatomic Contacts of Structural Units in PDB entry:
2F0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F0C entry

There are 3 chains in PDB entry 2F0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 17ASP 163
B
 GLU 16ASP 163
C
 THR 17ASP 163
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2F0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 31Right-handed alpha
Helix 2
2
A
110 114Right-handed 310
Helix 3
3
B
16 31Right-handed alpha
Helix 4
4
B
110 114Right-handed 310
Helix 5
5
C
17 31Right-handed alpha
Helix 6
6
C
110 114Right-handed 310
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There are 6 sheets in PDB entry 2F0C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 44first strand
Strand 2
C
48 50parallel
Strand 3
B
54 56parallel
Strand 4
A
60 61parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 44first strand
Strand 2
A
48 50parallel
Strand 3
C
54 56parallel
Strand 4
B
60 61parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 44first strand
Strand 2
B
48 50parallel
Strand 3
A
54 56parallel
Strand 4
C
60 61parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 72first strand
Strand 2
A
75 82anti-parallel
Strand 3
A
85 92anti-parallel
Strand 4
A
154 161anti-parallel
Strand 5
A
119 125anti-parallel
Strand 6
A
131 136anti-parallel
Strand 7
A
143 144anti-parallel
Strand 8
A
102 103anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 72first strand
Strand 2
B
75 82anti-parallel
Strand 3
B
85 92anti-parallel
Strand 4
B
154 161anti-parallel
Strand 5
B
119 125anti-parallel
Strand 6
B
131 136anti-parallel
Strand 7
B
143 144anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 72first strand
Strand 2
C
75 82anti-parallel
Strand 3
C
85 92anti-parallel
Strand 4
C
154 161anti-parallel
Strand 5
C
119 125anti-parallel
Strand 6
C
131 136anti-parallel
Strand 7
C
143 144anti-parallel
Strand 8
C
102 103anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il