Analysis of interatomic Contacts of Structural Units in PDB entry:
2F1C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F1C entry

There is 1 chain in PDB entry 2F1C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 ASN 4HIS 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 2F1C. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
140 145Right-handed alpha
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There are 2 sheets in PDB entry 2F1C. Click on sheet of interest to get list of strands forming it: A, B,

There are 16 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
199 201first strand
Strand 2
X
204 217anti-parallel
Strand 3
X
234 243anti-parallel
Strand 4
X
248 258anti-parallel
Strand 5
X
269 281anti-parallel
Strand 6
X
6 18anti-parallel
Strand 7
X
29 40anti-parallel
Strand 8
X
43 54anti-parallel
Strand 9
X
65 67anti-parallel
Strand 10
X
83 97anti-parallel
Strand 11
X
106 121anti-parallel
Strand 12
X
126 138anti-parallel
Strand 13
X
149 160anti-parallel
Strand 14
X
166 177anti-parallel
Strand 15
X
188 196anti-parallel
Strand 16
X
204 217anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
43 54first strand
Strand 2
X
65 67anti-parallel
Strand 3
X
83 97anti-parallel
Strand 4
X
70 79anti-parallel
Strand 5
X
43 54anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il