Analysis of interatomic Contacts of Structural Units in PDB entry:
2F1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F1V entry

There are 6 chains in PDB entry 2F1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2HIS 192
B
 GLU 2HIS 192
C
 GLU 2HIS 192
D
 GLU 2HIS 192
E
 GLU 2HIS 192
F
 GLU 2HIS 192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 2F1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
115 121Right-handed alpha
Helix 2
2
B
115 121Right-handed alpha
Helix 3
3
C
115 121Right-handed alpha
Helix 4
4
D
115 121Right-handed alpha
Helix 5
5
E
115 121Right-handed alpha
Helix 6
6
F
115 121Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 2F1V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 33first strand
Strand 2
A
61 67anti-parallel
Strand 3
A
71 79anti-parallel
Strand 4
A
96 114anti-parallel
Strand 5
A
131 143anti-parallel
Strand 6
A
148 157anti-parallel
Strand 7
A
181 191anti-parallel
Strand 8
A
6 16anti-parallel
Strand 9
A
36 46anti-parallel
Strand 10
A
51 58anti-parallel
Strand 11
A
82 88anti-parallel
Strand 12
A
96 114anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 128first strand
Strand 2
A
160 167anti-parallel
Strand 3
A
174 177anti-parallel
Back to list of sheets
Back to top of page

There are 12 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
61 67anti-parallel
Strand 3
B
71 79anti-parallel
Strand 4
B
96 114anti-parallel
Strand 5
B
131 143anti-parallel
Strand 6
B
148 157anti-parallel
Strand 7
B
181 191anti-parallel
Strand 8
B
6 16anti-parallel
Strand 9
B
36 46anti-parallel
Strand 10
B
51 58anti-parallel
Strand 11
B
82 88anti-parallel
Strand 12
B
96 114anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 128first strand
Strand 2
B
160 167anti-parallel
Strand 3
B
174 177anti-parallel
Back to list of sheets
Back to top of page

There are 12 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 33first strand
Strand 2
C
61 67anti-parallel
Strand 3
C
71 79anti-parallel
Strand 4
C
96 114anti-parallel
Strand 5
C
131 143anti-parallel
Strand 6
C
148 157anti-parallel
Strand 7
C
181 191anti-parallel
Strand 8
C
6 16anti-parallel
Strand 9
C
36 46anti-parallel
Strand 10
C
51 58anti-parallel
Strand 11
C
82 88anti-parallel
Strand 12
C
96 114anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
123 128first strand
Strand 2
C
160 167anti-parallel
Strand 3
C
174 177anti-parallel
Back to list of sheets
Back to top of page

There are 12 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 33first strand
Strand 2
D
61 67anti-parallel
Strand 3
D
71 79anti-parallel
Strand 4
D
96 114anti-parallel
Strand 5
D
131 143anti-parallel
Strand 6
D
148 157anti-parallel
Strand 7
D
181 191anti-parallel
Strand 8
D
6 16anti-parallel
Strand 9
D
36 46anti-parallel
Strand 10
D
51 58anti-parallel
Strand 11
D
82 88anti-parallel
Strand 12
D
96 114anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
123 128first strand
Strand 2
D
160 167anti-parallel
Strand 3
D
174 177anti-parallel
Back to list of sheets
Back to top of page

There are 12 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
32 33first strand
Strand 2
E
61 67anti-parallel
Strand 3
E
71 79anti-parallel
Strand 4
E
96 114anti-parallel
Strand 5
E
131 143anti-parallel
Strand 6
E
148 157anti-parallel
Strand 7
E
181 191anti-parallel
Strand 8
E
6 16anti-parallel
Strand 9
E
36 46anti-parallel
Strand 10
E
51 58anti-parallel
Strand 11
E
82 88anti-parallel
Strand 12
E
96 114anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
123 128first strand
Strand 2
E
160 167anti-parallel
Strand 3
E
174 177anti-parallel
Back to list of sheets
Back to top of page

There are 12 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
32 33first strand
Strand 2
F
61 67anti-parallel
Strand 3
F
71 79anti-parallel
Strand 4
F
96 114anti-parallel
Strand 5
F
131 143anti-parallel
Strand 6
F
148 157anti-parallel
Strand 7
F
181 191anti-parallel
Strand 8
F
6 16anti-parallel
Strand 9
F
36 46anti-parallel
Strand 10
F
51 58anti-parallel
Strand 11
F
82 88anti-parallel
Strand 12
F
96 114anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
123 128first strand
Strand 2
F
160 167anti-parallel
Strand 3
F
174 177anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il