Analysis of interatomic Contacts of Structural Units in PDB entry:
2F3G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F3G entry

There are 2 chains in PDB entry 2F3G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 19LYS 168
B
 THR 19LYS 168
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 2F3G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 35Right-handed 310
Helix 2
2
A
39 42Right-handed alpha
Helix 3
3
A
95 98Right-handed 310
Helix 4
4
A
124 130Right-handed alpha
Helix 5
5
A
143 145Right-handed 310
Helix 6
6
B
33 35Right-handed 310
Helix 7
7
B
39 42Right-handed alpha
Helix 8
8
B
95 98Right-handed 310
Helix 9
9
B
124 130Right-handed alpha
Helix 10
10
B
143 145Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 2F3G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 31first strand
Strand 2
A
48 54anti-parallel
Strand 3
A
136 140anti-parallel
Strand 4
A
86 90anti-parallel
Strand 5
A
76 81anti-parallel
Strand 6
A
65 67anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 105first strand
Strand 2
A
118 122anti-parallel
Strand 3
A
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 151first strand
Strand 2
A
162 167anti-parallel
Strand 3
A
20 23anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 31first strand
Strand 2
B
48 54anti-parallel
Strand 3
B
135 140anti-parallel
Strand 4
B
86 90anti-parallel
Strand 5
B
76 81anti-parallel
Strand 6
B
65 70anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 105first strand
Strand 2
B
118 122anti-parallel
Strand 3
B
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 151first strand
Strand 2
B
162 167anti-parallel
Strand 3
B
20 23anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il