Analysis of interatomic Contacts of Structural Units in PDB entry:
2F3T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2F3T entry

There are 6 chains in PDB entry 2F3T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	ALA 206
B	ALA 2	ASP 207
C	ALA 2	ALA 206
D	ALA 2	ALA 206
E	ALA 2	LEU 205
F	ALA 2	ALA 206

There are 60 helices in PDB entry 2F3T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	16	26	Right-handed alpha
Helix 2	2	A	58	68	Right-handed alpha
Helix 3	3	A	86	95	Right-handed alpha
Helix 4	4	A	104	115	Right-handed alpha
Helix 5	5	A	127	136	Right-handed alpha
Helix 6	6	A	142	158	Right-handed alpha
Helix 7	7	A	159	163	Right-handed 310
Helix 8	8	A	171	187	Right-handed alpha
Helix 9	9	A	189	197	Right-handed alpha
Helix 10	10	A	197	206	Right-handed alpha
Helix 11	11	B	16	26	Right-handed alpha
Helix 12	12	B	58	68	Right-handed alpha
Helix 13	13	B	86	94	Right-handed alpha
Helix 14	14	B	104	115	Right-handed alpha
Helix 15	15	B	127	136	Right-handed alpha
Helix 16	16	B	142	158	Right-handed alpha
Helix 17	17	B	159	163	Right-handed 310
Helix 18	18	B	171	187	Right-handed alpha
Helix 19	19	B	189	197	Right-handed alpha
Helix 20	20	B	197	206	Right-handed alpha
Helix 21	21	C	16	26	Right-handed alpha
Helix 22	22	C	58	68	Right-handed alpha
Helix 23	23	C	86	94	Right-handed alpha
Helix 24	24	C	104	115	Right-handed alpha
Helix 25	25	C	127	136	Right-handed alpha
Helix 26	26	C	142	158	Right-handed alpha
Helix 27	27	C	159	163	Right-handed 310
Helix 28	28	C	171	187	Right-handed alpha
Helix 29	29	C	189	197	Right-handed alpha
Helix 30	30	C	197	206	Right-handed alpha
Helix 31	31	D	16	26	Right-handed alpha
Helix 32	32	D	58	68	Right-handed alpha
Helix 33	33	D	86	94	Right-handed alpha
Helix 34	34	D	104	115	Right-handed alpha
Helix 35	35	D	127	136	Right-handed alpha
Helix 36	36	D	142	158	Right-handed alpha
Helix 37	37	D	159	163	Right-handed 310
Helix 38	38	D	171	187	Right-handed alpha
Helix 39	39	D	189	197	Right-handed alpha
Helix 40	40	D	197	206	Right-handed alpha
Helix 41	41	E	16	26	Right-handed alpha
Helix 42	42	E	58	68	Right-handed alpha
Helix 43	43	E	86	94	Right-handed alpha
Helix 44	44	E	104	115	Right-handed alpha
Helix 45	45	E	127	136	Right-handed alpha
Helix 46	46	E	142	158	Right-handed alpha
Helix 47	47	E	159	163	Right-handed 310
Helix 48	48	E	171	188	Right-handed alpha
Helix 49	49	E	189	197	Right-handed alpha
Helix 50	50	E	197	205	Right-handed alpha
Helix 51	51	F	16	26	Right-handed alpha
Helix 52	52	F	58	68	Right-handed alpha
Helix 53	53	F	86	94	Right-handed alpha
Helix 54	54	F	104	115	Right-handed alpha
Helix 55	55	F	127	136	Right-handed alpha
Helix 56	56	F	142	158	Right-handed alpha
Helix 57	57	F	159	163	Right-handed 310
Helix 58	58	F	171	187	Right-handed alpha
Helix 59	59	F	189	197	Right-handed alpha
Helix 60	60	F	197	206	Right-handed alpha

There are 12 sheets in PDB entry 2F3T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	35	first strand
Strand 2	A	98	102	parallel
Strand 3	A	6	10	parallel
Strand 4	A	119	124	parallel
Strand 5	A	165	168	parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	56	first strand
Strand 2	A	38	40	parallel
Strand 3	A	80	85	anti-parallel
Strand 4	A	71	77	anti-parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	35	first strand
Strand 2	B	98	102	parallel
Strand 3	B	6	10	parallel
Strand 4	B	119	124	parallel
Strand 5	B	165	168	parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	56	first strand
Strand 2	B	38	40	parallel
Strand 3	B	80	85	anti-parallel
Strand 4	B	71	77	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	35	first strand
Strand 2	C	98	102	parallel
Strand 3	C	6	10	parallel
Strand 4	C	118	124	parallel
Strand 5	C	165	168	parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	56	first strand
Strand 2	C	38	40	parallel
Strand 3	C	80	85	anti-parallel
Strand 4	C	71	77	anti-parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	35	first strand
Strand 2	D	98	102	parallel
Strand 3	D	6	10	parallel
Strand 4	D	119	124	parallel
Strand 5	D	165	168	parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	56	first strand
Strand 2	D	38	40	parallel
Strand 3	D	80	85	anti-parallel
Strand 4	D	71	77	anti-parallel

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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	35	first strand
Strand 2	E	98	102	parallel
Strand 3	E	6	10	parallel
Strand 4	E	119	124	parallel
Strand 5	E	165	168	parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	56	first strand
Strand 2	E	38	40	parallel
Strand 3	E	80	85	anti-parallel
Strand 4	E	71	77	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	35	first strand
Strand 2	F	98	102	parallel
Strand 3	F	6	10	parallel
Strand 4	F	119	124	parallel
Strand 5	F	165	168	parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	54	56	first strand
Strand 2	F	38	40	parallel
Strand 3	F	80	85	anti-parallel
Strand 4	F	71	77	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2F3T

Analysis of interatomic Contacts of Structural Units in PDB entry:
2F3T