Analysis of interatomic Contacts of Structural Units in PDB entry:
2F48


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F48 entry

There are 2 chains in PDB entry 2F48 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4PHE 554
B
 THR 3PHE 554
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 2F48. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 11Right-handed alpha
Helix 2
2
A
18 23Right-handed 310
Helix 3
3
A
24 26Right-handed 310
Helix 4
4
A
41 49Right-handed alpha
Helix 5
5
A
86 102Right-handed alpha
Helix 6
6
A
114 119Right-handed alpha
Helix 7
7
A
126 134Right-handed alpha
Helix 8
8
A
151 165Right-handed alpha
Helix 9
9
A
175 192Right-handed alpha
Helix 10
10
A
220 242Right-handed alpha
Helix 11
11
A
256 267Right-handed alpha
Helix 12
12
A
273 280Right-handed alpha
Helix 13
13
A
283 301Right-handed alpha
Helix 14
14
A
313 317Right-handed 310
Helix 15
15
A
318 335Right-handed alpha
Helix 16
16
A
335 340Right-handed alpha
Helix 17
17
A
343 355Right-handed alpha
Helix 18
18
A
356 365Right-handed alpha
Helix 19
19
A
367 380Right-handed alpha
Helix 20
20
A
393 411Right-handed alpha
Helix 21
21
A
427 432Right-handed alpha
Helix 22
22
A
436 456Right-handed alpha
Helix 23
23
A
471 475Right-handed 310
Helix 24
24
A
508 524Right-handed alpha
Helix 25
25
A
538 543Right-handed alpha
Helix 26
26
A
546 553Right-handed alpha
Helix 27
27
B
4 12Right-handed alpha
Helix 28
28
B
18 23Right-handed 310
Helix 29
29
B
24 26Right-handed 310
Helix 30
30
B
43 49Right-handed alpha
Helix 31
31
B
86 102Right-handed alpha
Helix 32
32
B
113 120Right-handed alpha
Helix 33
33
B
126 134Right-handed alpha
Helix 34
34
B
151 165Right-handed alpha
Helix 35
35
B
175 192Right-handed alpha
Helix 36
36
B
219 242Right-handed alpha
Helix 37
37
B
256 267Right-handed alpha
Helix 38
38
B
273 280Right-handed alpha
Helix 39
39
B
283 301Right-handed alpha
Helix 40
40
B
313 317Right-handed 310
Helix 41
41
B
318 329Right-handed alpha
Helix 42
42
B
329 334Right-handed alpha
Helix 43
43
B
336 340Right-handed 310
Helix 44
44
B
347 355Right-handed alpha
Helix 45
45
B
356 366Right-handed alpha
Helix 46
46
B
367 379Right-handed alpha
Helix 47
47
B
393 412Right-handed alpha
Helix 48
48
B
427 432Right-handed alpha
Helix 49
49
B
436 456Right-handed alpha
Helix 50
50
B
471 475Right-handed 310
Helix 51
51
B
483 486Right-handed 310
Helix 52
52
B
508 524Right-handed alpha
Helix 53
53
B
538 543Right-handed alpha
Helix 54
54
B
546 553Right-handed alpha
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There are 7 sheets in PDB entry 2F48. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
58 62anti-parallel
Strand 3
A
476 481anti-parallel
Strand 4
A
461 466anti-parallel
Strand 5
A
197 204parallel
Strand 6
A
169 174parallel
Strand 7
A
74 79parallel
Strand 8
A
106 110parallel
Strand 9
A
122 125anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
58 62anti-parallel
Strand 3
A
476 481anti-parallel
Strand 4
A
461 466anti-parallel
Strand 5
A
197 204parallel
Strand 6
A
218 219parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 271first strand
Strand 2
A
306 311parallel
Strand 3
A
245 250parallel
Strand 4
A
421 426parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
486 491first strand
Strand 2
A
494 499anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 32first strand
Strand 2
B
58 62anti-parallel
Strand 3
B
476 481anti-parallel
Strand 4
B
461 466anti-parallel
Strand 5
B
197 202parallel
Strand 6
B
169 174parallel
Strand 7
B
74 79parallel
Strand 8
B
106 110parallel
Strand 9
B
122 125anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 271first strand
Strand 2
B
306 311parallel
Strand 3
B
245 250parallel
Strand 4
B
421 426parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
487 491first strand
Strand 2
B
494 498anti-parallel
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