Analysis of interatomic Contacts of Structural Units in PDB entry:
2F49


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F49 entry

There are 3 chains in PDB entry 2F49 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3SER 353
B
 MET 1SER 353
C
 PRO 288ARG 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 2F49. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
49 66Right-handed alpha
Helix 2
2
A
100 107Right-handed alpha
Helix 3
3
A
110 131Right-handed alpha
Helix 4
4
A
139 141Right-handed 310
Helix 5
5
A
190 196Right-handed alpha
Helix 6
6
A
202 219Right-handed alpha
Helix 7
7
A
227 240Right-handed alpha
Helix 8
8
A
253 262Right-handed alpha
Helix 9
9
A
270 275Right-handed alpha
Helix 10
10
A
279 290Right-handed alpha
Helix 11
11
A
293 297Right-handed 310
Helix 12
12
A
299 305Right-handed alpha
Helix 13
13
A
306 310Right-handed 310
Helix 14
14
A
325 334Right-handed 310
Helix 15
15
A
340 352Right-handed alpha
Helix 16
16
B
49 66Right-handed alpha
Helix 17
17
B
100 107Right-handed alpha
Helix 18
18
B
110 131Right-handed alpha
Helix 19
19
B
139 141Right-handed 310
Helix 20
20
B
190 196Right-handed alpha
Helix 21
21
B
201 219Right-handed alpha
Helix 22
22
B
227 240Right-handed alpha
Helix 23
23
B
246 251Right-handed 310
Helix 24
24
B
253 262Right-handed alpha
Helix 25
25
B
270 275Right-handed alpha
Helix 26
26
B
279 290Right-handed alpha
Helix 27
27
B
299 305Right-handed alpha
Helix 28
28
B
306 310Right-handed 310
Helix 29
29
B
325 334Right-handed 310
Helix 30
30
B
340 353Right-handed alpha
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There are 9 sheets in PDB entry 2F49. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 10first strand
Strand 2
C
289 295anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 21first strand
Strand 2
A
25 32anti-parallel
Strand 3
A
38 44anti-parallel
Strand 4
A
89 93anti-parallel
Strand 5
A
74 77anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
143 145anti-parallel
Strand 3
A
151 153anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 134first strand
Strand 2
A
160 161anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
B
338 339parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 339first strand
Strand 2
B
182 183parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 21first strand
Strand 2
B
25 32anti-parallel
Strand 3
B
38 44anti-parallel
Strand 4
B
89 94anti-parallel
Strand 5
B
74 77anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 99first strand
Strand 2
B
143 145anti-parallel
Strand 3
B
151 153anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 134first strand
Strand 2
B
160 161anti-parallel
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