Analysis of interatomic Contacts of Structural Units in PDB entry:
2F5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F5X entry

There are 3 chains in PDB entry 2F5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 2GLN 300
B
 GLU 1GLN 300
C
 TYR 2GLN 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 2F5X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 35Right-handed alpha
Helix 2
2
A
45 47Right-handed 310
Helix 3
3
A
48 57Right-handed alpha
Helix 4
4
A
70 75Right-handed alpha
Helix 5
5
A
76 78Right-handed 310
Helix 6
6
A
113 125Right-handed alpha
Helix 7
7
A
137 151Right-handed alpha
Helix 8
8
A
161 171Right-handed alpha
Helix 9
9
A
181 190Right-handed alpha
Helix 10
10
A
236 252Right-handed alpha
Helix 11
11
A
253 263Right-handed alpha
Helix 12
12
A
269 272Right-handed 310
Helix 13
13
A
273 295Right-handed alpha
Helix 14
14
B
17 35Right-handed alpha
Helix 15
15
B
45 47Right-handed 310
Helix 16
16
B
48 58Right-handed alpha
Helix 17
17
B
70 75Right-handed alpha
Helix 18
18
B
76 78Right-handed 310
Helix 19
19
B
113 125Right-handed alpha
Helix 20
20
B
137 151Right-handed alpha
Helix 21
21
B
161 171Right-handed alpha
Helix 22
22
B
181 190Right-handed alpha
Helix 23
23
B
236 252Right-handed alpha
Helix 24
24
B
253 263Right-handed alpha
Helix 25
25
B
269 272Right-handed 310
Helix 26
26
B
273 295Right-handed alpha
Helix 27
27
C
17 35Right-handed alpha
Helix 28
28
C
45 47Right-handed 310
Helix 29
29
C
48 57Right-handed alpha
Helix 30
30
C
70 75Right-handed alpha
Helix 31
31
C
76 78Right-handed 310
Helix 32
32
C
113 125Right-handed alpha
Helix 33
33
C
137 151Right-handed alpha
Helix 34
34
C
161 171Right-handed alpha
Helix 35
35
C
181 190Right-handed alpha
Helix 36
36
C
236 253Right-handed alpha
Helix 37
37
C
253 263Right-handed alpha
Helix 38
38
C
269 272Right-handed 310
Helix 39
39
C
273 295Right-handed alpha
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There are 6 sheets in PDB entry 2F5X. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
7 11parallel
Strand 3
A
64 69parallel
Strand 4
A
224 232anti-parallel
Strand 5
A
90 105anti-parallel
Strand 6
A
194 198anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 158first strand
Strand 2
A
129 132parallel
Strand 3
A
176 180parallel
Strand 4
A
90 105anti-parallel
Strand 5
A
266 267anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 42first strand
Strand 2
B
7 11parallel
Strand 3
B
64 69parallel
Strand 4
B
224 232anti-parallel
Strand 5
B
90 106anti-parallel
Strand 6
B
193 198anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 158first strand
Strand 2
B
129 132parallel
Strand 3
B
176 180parallel
Strand 4
B
90 106anti-parallel
Strand 5
B
266 267anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 42first strand
Strand 2
C
7 11parallel
Strand 3
C
64 69parallel
Strand 4
C
224 232anti-parallel
Strand 5
C
90 106anti-parallel
Strand 6
C
193 198anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 158first strand
Strand 2
C
129 132parallel
Strand 3
C
176 180parallel
Strand 4
C
90 106anti-parallel
Strand 5
C
266 267anti-parallel
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