Analysis of interatomic Contacts of Structural Units in PDB entry:
2F68


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F68 entry

There is 1 chain in PDB entry 2F68 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 HIS 27LYS 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 2F68. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
33 37Right-handed alpha
Helix 2
2
X
117 120Right-handed 310
Helix 3
3
X
219 222Right-handed 310
Helix 4
4
X
238 247Right-handed alpha
Helix 5
5
X
266 271Right-handed alpha
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There are 8 sheets in PDB entry 2F68. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
31 32first strand
Strand 2
X
71 75parallel
Strand 3
X
110 115anti-parallel
Strand 4
X
99 107anti-parallel
Strand 5
X
90 96anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
38 44first strand
Strand 2
X
52 61anti-parallel
Strand 3
X
123 137anti-parallel
Strand 4
X
83 87anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
38 44first strand
Strand 2
X
52 61anti-parallel
Strand 3
X
123 137anti-parallel
Strand 4
X
321 328anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
47 48first strand
Strand 2
X
156 162parallel
Strand 3
X
148 153anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
175 177first strand
Strand 2
X
187 194anti-parallel
Strand 3
X
273 283anti-parallel
Strand 4
X
215 217anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
175 177first strand
Strand 2
X
187 194anti-parallel
Strand 3
X
273 283anti-parallel
Strand 4
X
224 228anti-parallel
Strand 5
X
232 234anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
251 255first strand
Strand 2
X
260 265anti-parallel
Strand 3
X
205 211anti-parallel
Strand 4
X
290 299anti-parallel
Strand 5
X
307 311anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
251 255first strand
Strand 2
X
260 265anti-parallel
Strand 3
X
205 211anti-parallel
Strand 4
X
290 299anti-parallel
Strand 5
X
314 317anti-parallel
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