Analysis of interatomic Contacts of Structural Units in PDB entry:
2F6K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F6K entry

There are 2 chains in PDB entry 2F6K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLU 307
B
 SER 2GLU 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 2F6K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 23Right-handed alpha
Helix 2
2
A
26 30Right-handed 310
Helix 3
3
A
36 47Right-handed alpha
Helix 4
4
A
65 87Right-handed alpha
Helix 5
5
A
101 115Right-handed alpha
Helix 6
6
A
134 136Right-handed 310
Helix 7
7
A
137 146Right-handed alpha
Helix 8
8
A
170 190Right-handed alpha
Helix 9
9
A
191 196Right-handed alpha
Helix 10
10
A
204 208Right-handed 310
Helix 11
11
A
209 226Right-handed alpha
Helix 12
12
A
228 236Right-handed alpha
Helix 13
13
A
247 253Right-handed alpha
Helix 14
14
A
257 259Right-handed 310
Helix 15
15
A
271 285Right-handed alpha
Helix 16
16
A
289 298Right-handed alpha
Helix 17
17
A
298 307Right-handed alpha
Helix 18
18
B
12 23Right-handed alpha
Helix 19
19
B
26 30Right-handed 310
Helix 20
20
B
36 47Right-handed alpha
Helix 21
21
B
65 87Right-handed alpha
Helix 22
22
B
101 115Right-handed alpha
Helix 23
23
B
134 136Right-handed 310
Helix 24
24
B
137 146Right-handed alpha
Helix 25
25
B
170 190Right-handed alpha
Helix 26
26
B
191 196Right-handed alpha
Helix 27
27
B
204 208Right-handed 310
Helix 28
28
B
209 224Right-handed alpha
Helix 29
29
B
228 236Right-handed alpha
Helix 30
30
B
247 253Right-handed alpha
Helix 31
31
B
257 259Right-handed 310
Helix 32
32
B
271 285Right-handed alpha
Helix 33
33
B
289 298Right-handed alpha
Helix 34
34
B
298 307Right-handed alpha
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There are 4 sheets in PDB entry 2F6K. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 9first strand
Strand 2
A
49 55parallel
Strand 3
A
91 95parallel
Strand 4
A
120 124parallel
Strand 5
A
150 154parallel
Strand 6
A
200 203parallel
Strand 7
A
237 239parallel
Strand 8
A
261 262parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
130 131anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 9first strand
Strand 2
B
49 55parallel
Strand 3
B
91 95parallel
Strand 4
B
120 124parallel
Strand 5
B
150 154parallel
Strand 6
B
200 203parallel
Strand 7
B
237 239parallel
Strand 8
B
261 262parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 127first strand
Strand 2
B
130 131anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il