Analysis of interatomic Contacts of Structural Units in PDB entry:
2F7F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F7F entry

There is 1 chain in PDB entry 2F7F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4HIS 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2F7F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 28Right-handed alpha
Helix 2
2
A
44 48Right-handed 310
Helix 3
3
A
55 65Right-handed alpha
Helix 4
4
A
69 79Right-handed alpha
Helix 5
5
A
83 92Right-handed alpha
Helix 6
6
A
121 153Right-handed alpha
Helix 7
7
A
161 165Right-handed 310
Helix 8
8
A
167 182Right-handed alpha
Helix 9
9
A
188 196Right-handed alpha
Helix 10
10
A
204 212Right-handed alpha
Helix 11
11
A
213 225Right-handed alpha
Helix 12
12
A
240 253Right-handed alpha
Helix 13
13
A
254 256Right-handed 310
Helix 14
14
A
267 282Right-handed alpha
Helix 15
15
A
296 306Right-handed alpha
Helix 16
16
A
316 321Right-handed alpha
Helix 17
17
A
387 391Right-handed 310
Helix 18
18
A
432 447Right-handed alpha
Helix 19
19
A
448 453Right-handed alpha
Helix 20
20
A
465 483Right-handed alpha
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There are 5 sheets in PDB entry 2F7F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 346first strand
Strand 2
A
331 338anti-parallel
Strand 3
A
34 40anti-parallel
Strand 4
A
115 120anti-parallel
Strand 5
A
98 101anti-parallel
Strand 6
A
418 422anti-parallel
Strand 7
A
425 426anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
107 108anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
157 159parallel
Strand 3
A
312 315parallel
Strand 4
A
288 291parallel
Strand 5
A
257 263parallel
Strand 6
A
227 231parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 415first strand
Strand 2
A
363 370anti-parallel
Strand 3
A
376 383anti-parallel
Strand 4
A
462 464parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 397first strand
Strand 2
A
405 409anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il