Analysis of interatomic Contacts of Structural Units in PDB entry:
2F7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F7L entry

There are 2 chains in PDB entry 2F7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 455
B
 MET 1LYS 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 2F7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 35Right-handed alpha
Helix 2
2
A
49 64Right-handed alpha
Helix 3
3
A
75 87Right-handed alpha
Helix 4
4
A
117 131Right-handed alpha
Helix 5
5
A
137 141Right-handed 310
Helix 6
6
A
150 161Right-handed alpha
Helix 7
7
A
164 172Right-handed alpha
Helix 8
8
A
182 186Right-handed 310
Helix 9
9
A
187 195Right-handed alpha
Helix 10
10
A
222 232Right-handed alpha
Helix 11
11
A
258 273Right-handed alpha
Helix 12
12
A
289 297Right-handed alpha
Helix 13
13
A
308 319Right-handed alpha
Helix 14
14
A
341 357Right-handed alpha
Helix 15
15
A
359 366Right-handed alpha
Helix 16
16
A
384 397Right-handed alpha
Helix 17
17
A
437 453Right-handed alpha
Helix 18
18
B
19 35Right-handed alpha
Helix 19
19
B
49 64Right-handed alpha
Helix 20
20
B
75 86Right-handed alpha
Helix 21
21
B
117 131Right-handed alpha
Helix 22
22
B
137 141Right-handed 310
Helix 23
23
B
150 161Right-handed alpha
Helix 24
24
B
164 172Right-handed alpha
Helix 25
25
B
182 186Right-handed 310
Helix 26
26
B
187 195Right-handed alpha
Helix 27
27
B
222 232Right-handed alpha
Helix 28
28
B
258 274Right-handed alpha
Helix 29
29
B
289 296Right-handed alpha
Helix 30
30
B
297 299Right-handed 310
Helix 31
31
B
308 319Right-handed alpha
Helix 32
32
B
341 355Right-handed alpha
Helix 33
33
B
359 366Right-handed alpha
Helix 34
34
B
384 397Right-handed alpha
Helix 35
35
B
437 453Right-handed alpha
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There are 8 sheets in PDB entry 2F7L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 13first strand
Strand 2
A
103 109anti-parallel
Strand 3
A
90 94anti-parallel
Strand 4
A
39 44parallel
Strand 5
A
67 73parallel
Strand 6
A
146 147parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 201first strand
Strand 2
A
174 178parallel
Strand 3
A
236 239parallel
Strand 4
A
248 251anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 305first strand
Strand 2
A
280 284parallel
Strand 3
A
323 326parallel
Strand 4
A
329 332anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 378first strand
Strand 2
A
428 435anti-parallel
Strand 3
A
416 422anti-parallel
Strand 4
A
409 413anti-parallel
Strand 5
A
402 404anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
103 109anti-parallel
Strand 3
B
90 94anti-parallel
Strand 4
B
39 44parallel
Strand 5
B
67 73parallel
Strand 6
B
146 147parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 201first strand
Strand 2
B
174 178parallel
Strand 3
B
236 240parallel
Strand 4
B
247 250anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
301 305first strand
Strand 2
B
280 284parallel
Strand 3
B
323 326parallel
Strand 4
B
329 332anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
371 375first strand
Strand 2
B
431 435anti-parallel
Strand 3
B
416 420anti-parallel
Strand 4
B
409 412anti-parallel
Strand 5
B
402 404anti-parallel
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