Analysis of interatomic Contacts of Structural Units in PDB entry:
2F96


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F96 entry

There are 2 chains in PDB entry 2F96 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 19MSE 220
B
 ARG 19MSE 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2F96. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 25Right-handed alpha
Helix 2
2
A
84 90Right-handed alpha
Helix 3
3
A
104 121Right-handed alpha
Helix 4
4
A
134 148Right-handed alpha
Helix 5
5
A
163 171Right-handed alpha
Helix 6
6
A
176 182Right-handed alpha
Helix 7
7
A
195 215Right-handed alpha
Helix 8
8
B
21 25Right-handed alpha
Helix 9
9
B
84 90Right-handed alpha
Helix 10
10
B
104 122Right-handed alpha
Helix 11
11
B
134 148Right-handed alpha
Helix 12
12
B
163 171Right-handed alpha
Helix 13
13
B
176 182Right-handed alpha
Helix 14
14
B
195 215Right-handed alpha
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There are 4 sheets in PDB entry 2F96. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 162first strand
Strand 2
A
126 131parallel
Strand 3
A
29 38parallel
Strand 4
A
48 55anti-parallel
Strand 5
A
69 73anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
64 66anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 162first strand
Strand 2
B
126 131parallel
Strand 3
B
29 38parallel
Strand 4
B
48 55anti-parallel
Strand 5
B
69 73anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 58first strand
Strand 2
B
64 66anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il