Analysis of interatomic Contacts of Structural Units in PDB entry:
2F9R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F9R entry

There are 4 chains in PDB entry 2F9R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ASN 285
B
 ALA 1ASN 285
C
 ALA 1ASN 285
D
 ALA 1ASN 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 2F9R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 27Right-handed alpha
Helix 2
2
A
63 75Right-handed alpha
Helix 3
3
A
98 117Right-handed alpha
Helix 4
4
A
118 122Right-handed 310
Helix 5
5
A
135 137Right-handed 310
Helix 6
6
A
138 152Right-handed alpha
Helix 7
7
A
154 159Right-handed 310
Helix 8
8
A
175 187Right-handed alpha
Helix 9
9
A
202 218Right-handed alpha
Helix 10
10
A
234 245Right-handed alpha
Helix 11
11
A
253 263Right-handed alpha
Helix 12
12
B
18 26Right-handed alpha
Helix 13
13
B
63 74Right-handed alpha
Helix 14
14
B
98 100Right-handed 310
Helix 15
15
B
101 117Right-handed alpha
Helix 16
16
B
118 122Right-handed 310
Helix 17
17
B
135 137Right-handed 310
Helix 18
18
B
138 152Right-handed alpha
Helix 19
19
B
154 159Right-handed 310
Helix 20
20
B
175 187Right-handed alpha
Helix 21
21
B
202 219Right-handed alpha
Helix 22
22
B
234 245Right-handed alpha
Helix 23
23
B
253 263Right-handed alpha
Helix 24
24
C
18 27Right-handed alpha
Helix 25
25
C
63 74Right-handed alpha
Helix 26
26
C
98 117Right-handed alpha
Helix 27
27
C
118 122Right-handed 310
Helix 28
28
C
138 152Right-handed alpha
Helix 29
29
C
154 159Right-handed 310
Helix 30
30
C
175 187Right-handed alpha
Helix 31
31
C
202 218Right-handed alpha
Helix 32
32
C
234 245Right-handed alpha
Helix 33
33
C
253 261Right-handed alpha
Helix 34
34
D
18 26Right-handed alpha
Helix 35
35
D
63 75Right-handed alpha
Helix 36
36
D
98 117Right-handed alpha
Helix 37
37
D
118 122Right-handed 310
Helix 38
38
D
138 152Right-handed alpha
Helix 39
39
D
154 159Right-handed 310
Helix 40
40
D
175 187Right-handed alpha
Helix 41
41
D
202 219Right-handed alpha
Helix 42
42
D
234 245Right-handed alpha
Helix 43
43
D
253 263Right-handed alpha
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There are 8 sheets in PDB entry 2F9R. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
41 46anti-parallel
Strand 3
A
30 38anti-parallel
Strand 4
A
5 11parallel
Strand 5
A
248 251parallel
Strand 6
A
226 230parallel
Strand 7
A
193 196parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 165first strand
Strand 2
A
128 133parallel
Strand 3
A
87 92parallel
Strand 4
A
30 38parallel
Strand 5
A
5 11parallel
Strand 6
A
270 272parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
41 46anti-parallel
Strand 3
B
30 38anti-parallel
Strand 4
B
5 11parallel
Strand 5
B
248 251parallel
Strand 6
B
226 229parallel
Strand 7
B
193 196parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 165first strand
Strand 2
B
128 133parallel
Strand 3
B
87 92parallel
Strand 4
B
30 38parallel
Strand 5
B
5 11parallel
Strand 6
B
270 272parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 62first strand
Strand 2
C
41 46anti-parallel
Strand 3
C
30 38anti-parallel
Strand 4
C
5 11parallel
Strand 5
C
248 251parallel
Strand 6
C
226 229parallel
Strand 7
C
193 196parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
161 165first strand
Strand 2
C
128 133parallel
Strand 3
C
87 92parallel
Strand 4
C
30 38parallel
Strand 5
C
5 11parallel
Strand 6
C
270 272parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 62first strand
Strand 2
D
41 46anti-parallel
Strand 3
D
30 38anti-parallel
Strand 4
D
5 11parallel
Strand 5
D
248 251parallel
Strand 6
D
226 230parallel
Strand 7
D
193 196parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
161 165first strand
Strand 2
D
128 133parallel
Strand 3
D
87 92parallel
Strand 4
D
30 38parallel
Strand 5
D
5 11parallel
Strand 6
D
270 272parallel
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