Analysis of interatomic Contacts of Structural Units in PDB entry:
2F9Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F9Z entry

There are 4 chains in PDB entry 2F9Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3ILE 203
B
 MET 1ILE 203
C
 ALA -1ILE 157
D
 ALA -1ILE 157
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2F9Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 30Right-handed alpha
Helix 2
2
A
45 50Right-handed alpha
Helix 3
3
A
81 93Right-handed alpha
Helix 4
4
A
103 130Right-handed alpha
Helix 5
5
A
145 156Right-handed alpha
Helix 6
6
A
192 201Right-handed alpha
Helix 7
7
B
4 31Right-handed alpha
Helix 8
8
B
80 91Right-handed alpha
Helix 9
9
B
103 130Right-handed alpha
Helix 10
10
B
145 151Right-handed alpha
Helix 11
11
B
192 200Right-handed alpha
Helix 12
12
C
56 59Right-handed 310
Helix 13
13
C
60 74Right-handed alpha
Helix 14
14
C
78 82Right-handed 310
Helix 15
15
C
99 115Right-handed alpha
Helix 16
16
D
60 74Right-handed alpha
Helix 17
17
D
78 82Right-handed 310
Helix 18
18
D
99 115Right-handed alpha
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There are 8 sheets in PDB entry 2F9Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 44first strand
Strand 2
A
165 174anti-parallel
Strand 3
A
181 189anti-parallel
Strand 4
A
73 80anti-parallel
Strand 5
A
59 69anti-parallel
Strand 6
A
133 135anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 44first strand
Strand 2
A
165 174anti-parallel
Strand 3
A
181 189anti-parallel
Strand 4
A
73 80anti-parallel
Strand 5
A
59 69anti-parallel
Strand 6
A
139 144anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 42first strand
Strand 2
B
166 170anti-parallel
Strand 3
B
183 189anti-parallel
Strand 4
B
73 78anti-parallel
Strand 5
B
59 69anti-parallel
Strand 6
B
133 135anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 42first strand
Strand 2
B
166 170anti-parallel
Strand 3
B
183 189anti-parallel
Strand 4
B
73 78anti-parallel
Strand 5
B
59 69anti-parallel
Strand 6
B
139 144anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 4first strand
Strand 2
C
18 24parallel
Strand 3
C
130 135anti-parallel
Strand 4
C
140 144anti-parallel
Strand 5
C
154 157anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 14first strand
Strand 2
C
39 45anti-parallel
Strand 3
C
28 34anti-parallel
Strand 4
C
83 88anti-parallel
Strand 5
C
119 124parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 4first strand
Strand 2
D
18 24parallel
Strand 3
D
130 135anti-parallel
Strand 4
D
140 144anti-parallel
Strand 5
D
154 157anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 14first strand
Strand 2
D
39 45anti-parallel
Strand 3
D
28 34anti-parallel
Strand 4
D
83 88anti-parallel
Strand 5
D
119 124parallel
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