Analysis of interatomic Contacts of Structural Units in PDB entry:
2FAY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FAY entry

There is 1 chain in PDB entry 2FAY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 187LYS 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2FAY. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
188 194Right-handed alpha
Helix 2
2
A
215 230Right-handed alpha
Helix 3
3
A
249 258Right-handed alpha
Helix 4
4
A
267 278Right-handed alpha
Helix 5
5
A
294 298Right-handed 310
Helix 6
6
A
327 338Right-handed alpha
Helix 7
7
A
357 370Right-handed alpha
Helix 8
8
A
383 392Right-handed alpha
Helix 9
9
A
401 419Right-handed alpha
Helix 10
10
A
419 427Right-handed alpha
Helix 11
11
A
428 448Right-handed alpha
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There are 2 sheets in PDB entry 2FAY. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
288 291first strand
Strand 2
A
260 264parallel
Strand 3
A
238 242parallel
Strand 4
A
311 317parallel
Strand 5
A
339 352parallel
Strand 6
A
451 459anti-parallel
Strand 7
A
394 400anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
302 304first strand
Strand 2
A
307 309anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il