Analysis of interatomic Contacts of Structural Units in PDB entry:
2FCO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FCO entry

There are 2 chains in PDB entry 2FCO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 30ARG 200
B
 ARG 29ARG 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2FCO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 47Right-handed alpha
Helix 2
2
A
112 114Right-handed 310
Helix 3
3
A
115 128Right-handed alpha
Helix 4
4
A
149 159Right-handed alpha
Helix 5
5
A
169 176Right-handed alpha
Helix 6
6
A
188 198Right-handed alpha
Helix 7
7
B
32 47Right-handed alpha
Helix 8
8
B
112 114Right-handed 310
Helix 9
9
B
115 128Right-handed alpha
Helix 10
10
B
140 142Right-handed 310
Helix 11
11
B
149 161Right-handed alpha
Helix 12
12
B
169 176Right-handed alpha
Helix 13
13
B
188 198Right-handed alpha
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There are 4 sheets in PDB entry 2FCO. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
87 91anti-parallel
Strand 3
A
94 103anti-parallel
Strand 4
A
131 138parallel
Strand 5
A
143 148anti-parallel
Strand 6
A
177 178anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 110first strand
Strand 2
A
166 168anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 54first strand
Strand 2
B
87 91anti-parallel
Strand 3
B
94 103anti-parallel
Strand 4
B
131 138parallel
Strand 5
B
143 148anti-parallel
Strand 6
B
177 178anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 110first strand
Strand 2
B
166 168anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il