Analysis of interatomic Contacts of Structural Units in PDB entry:
2FDR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FDR entry

There is 1 chain in PDB entry 2FDR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3GLU 224
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2FDR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 33Right-handed alpha
Helix 2
2
A
38 47Right-handed alpha
Helix 3
3
A
50 63Right-handed alpha
Helix 4
4
A
68 86Right-handed alpha
Helix 5
5
A
91 99Right-handed alpha
Helix 6
6
A
110 121Right-handed alpha
Helix 7
7
A
123 127Right-handed 310
Helix 8
8
A
134 138Right-handed alpha
Helix 9
9
A
146 156Right-handed alpha
Helix 10
10
A
159 161Right-handed 310
Helix 11
11
A
169 179Right-handed alpha
Helix 12
12
A
195 204Right-handed alpha
Helix 13
13
A
211 213Right-handed 310
Helix 14
14
A
214 223Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2FDR.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
103 107parallel
Strand 3
A
6 9parallel
Strand 4
A
163 167parallel
Strand 5
A
182 186parallel
Strand 6
A
207 209parallel
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