Analysis of interatomic Contacts of Structural Units in PDB entry:
2FGT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FGT entry

There is 1 chain in PDB entry 2FGT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 50LEU 447
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2FGT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
58 63Right-handed alpha
Helix 2
2
A
81 92Right-handed alpha
Helix 3
3
A
93 95Right-handed 310
Helix 4
4
A
104 107Right-handed 310
Helix 5
5
A
108 117Right-handed alpha
Helix 6
6
A
136 144Right-handed alpha
Helix 7
7
A
190 202Right-handed alpha
Helix 8
8
A
203 205Right-handed 310
Helix 9
9
A
239 248Right-handed alpha
Helix 10
10
A
250 254Right-handed 310
Helix 11
11
A
296 311Right-handed alpha
Helix 12
12
A
388 397Right-handed alpha
Helix 13
13
A
402 404Right-handed 310
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There are 5 sheets in PDB entry 2FGT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 78first strand
Strand 2
A
67 72anti-parallel
Strand 3
A
125 135anti-parallel
Strand 4
A
154 161anti-parallel
Strand 5
A
169 175anti-parallel
Strand 6
A
180 187anti-parallel
Strand 7
A
96 102anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 213first strand
Strand 2
A
217 222anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 229first strand
Strand 2
A
382 385anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 267first strand
Strand 2
A
272 276anti-parallel
Strand 3
A
281 285anti-parallel
Strand 4
A
363 369anti-parallel
Strand 5
A
353 358anti-parallel
Strand 6
A
329 335anti-parallel
Strand 7
A
318 323anti-parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 267first strand
Strand 2
A
272 276anti-parallel
Strand 3
A
281 285anti-parallel
Strand 4
A
363 369anti-parallel
Strand 5
A
353 358anti-parallel
Strand 6
A
329 335anti-parallel
Strand 7
A
338 342anti-parallel
Strand 8
A
406 415parallel
Strand 9
A
429 436anti-parallel
Strand 10
A
439 443anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il