Analysis of interatomic Contacts of Structural Units in PDB entry:
2FJE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FJE entry

There are 4 chains in PDB entry 2FJE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2PHE 643
C
 VAL 2002PHE 2643
B
 PRO 702ALA 850
D
 PRO 2702ALA 2850
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 2FJE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 16Right-handed 310
Helix 2
2
A
31 46Right-handed alpha
Helix 3
3
A
88 100Right-handed alpha
Helix 4
4
A
105 126Right-handed alpha
Helix 5
5
A
152 166Right-handed alpha
Helix 6
6
A
227 232Right-handed 310
Helix 7
7
A
241 251Right-handed alpha
Helix 8
8
A
273 279Right-handed alpha
Helix 9
9
A
291 296Right-handed alpha
Helix 10
10
A
297 304Right-handed 310
Helix 11
11
A
305 309Right-handed 310
Helix 12
12
A
313 327Right-handed alpha
Helix 13
13
A
335 345Right-handed alpha
Helix 14
14
A
347 364Right-handed alpha
Helix 15
15
A
366 376Right-handed alpha
Helix 16
16
A
414 419Right-handed alpha
Helix 17
17
A
438 441Right-handed 310
Helix 18
18
A
447 471Right-handed alpha
Helix 19
19
A
477 499Right-handed alpha
Helix 20
20
A
500 502Right-handed 310
Helix 21
21
A
513 529Right-handed alpha
Helix 22
22
A
531 535Right-handed 310
Helix 23
23
A
539 558Right-handed alpha
Helix 24
24
A
564 591Right-handed alpha
Helix 25
30
C
2012 2016Right-handed 310
Helix 26
31
C
2031 2045Right-handed alpha
Helix 27
32
C
2046 2048Right-handed 310
Helix 28
33
C
2088 2100Right-handed alpha
Helix 29
34
C
2105 2126Right-handed alpha
Helix 30
35
C
2152 2166Right-handed alpha
Helix 31
36
C
2227 2232Right-handed 310
Helix 32
37
C
2241 2251Right-handed alpha
Helix 33
38
C
2273 2279Right-handed alpha
Helix 34
39
C
2291 2296Right-handed alpha
Helix 35
40
C
2297 2301Right-handed 310
Helix 36
41
C
2305 2309Right-handed 310
Helix 37
42
C
2313 2328Right-handed alpha
Helix 38
43
C
2335 2345Right-handed alpha
Helix 39
44
C
2347 2364Right-handed alpha
Helix 40
45
C
2366 2376Right-handed alpha
Helix 41
46
C
2414 2419Right-handed alpha
Helix 42
47
C
2438 2441Right-handed 310
Helix 43
48
C
2447 2471Right-handed alpha
Helix 44
49
C
2477 2499Right-handed alpha
Helix 45
50
C
2500 2502Right-handed 310
Helix 46
51
C
2513 2529Right-handed alpha
Helix 47
52
C
2531 2535Right-handed 310
Helix 48
53
C
2539 2558Right-handed alpha
Helix 49
54
C
2564 2591Right-handed alpha
Helix 50
25
B
719 725Right-handed alpha
Helix 51
26
B
743 747Right-handed 310
Helix 52
27
B
751 757Right-handed alpha
Helix 53
28
B
824 828Right-handed 310
Helix 54
29
B
835 839Right-handed 310
Helix 55
55
D
2719 2725Right-handed alpha
Helix 56
56
D
2743 2747Right-handed 310
Helix 57
57
D
2751 2757Right-handed alpha
Helix 58
58
D
2822 2827Right-handed alpha
Helix 59
59
D
2835 2839Right-handed 310
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There are 18 sheets in PDB entry 2FJE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 22first strand
Strand 2
A
202 206parallel
Strand 3
A
189 196anti-parallel
Strand 4
A
174 181anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 172first strand
Strand 2
A
52 56parallel
Strand 3
A
25 28parallel
Strand 4
A
209 212parallel
Strand 5
A
434 436parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
146 150anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 404first strand
Strand 2
A
254 255anti-parallel
Strand 3
A
615 622anti-parallel
Strand 4
A
627 634anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 266first strand
Strand 2
A
385 389anti-parallel
Strand 3
A
332 334anti-parallel
Strand 4
A
284 285anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 538first strand
Strand 2
A
601 602parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
703 705first strand
Strand 2
B
762 764anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
730 733first strand
Strand 2
B
738 741anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
776 781first strand
Strand 2
B
785 791anti-parallel
Strand 3
B
797 803anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2018 2022first strand
Strand 2
C
2202 2206parallel
Strand 3
C
2185 2196anti-parallel
Strand 4
C
2174 2182anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2170 2171first strand
Strand 2
C
2052 2055parallel
Strand 3
C
2025 2028parallel
Strand 4
C
2209 2212parallel
Strand 5
C
2434 2436parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2070 2073first strand
Strand 2
C
2146 2150anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2403 2404first strand
Strand 2
C
2254 2255anti-parallel
Strand 3
C
2615 2622anti-parallel
Strand 4
C
2627 2634anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2264 2266first strand
Strand 2
C
2385 2389anti-parallel
Strand 3
C
2332 2334anti-parallel
Strand 4
C
2284 2285anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2537 2538first strand
Strand 2
C
2601 2602parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2703 2705first strand
Strand 2
D
2762 2764anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2730 2733first strand
Strand 2
D
2738 2741anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2776 2781first strand
Strand 2
D
2785 2791anti-parallel
Strand 3
D
2797 2803anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il