Analysis of interatomic Contacts of Structural Units in PDB entry:
2FJI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FJI entry

There are 2 chains in PDB entry 2FJI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 GLY 407GLN 805
2
 GLY 407GLN 805
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 2FJI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
1
411 448Right-handed alpha
Helix 2
2
1
462 482Right-handed alpha
Helix 3
3
1
484 523Right-handed alpha
Helix 4
4
1
526 530Right-handed 310
Helix 5
5
1
540 568Right-handed alpha
Helix 6
6
1
571 584Right-handed alpha
Helix 7
7
1
585 607Right-handed alpha
Helix 8
8
1
608 613Right-handed alpha
Helix 9
9
1
617 621Right-handed 310
Helix 10
10
1
624 641Right-handed alpha
Helix 11
11
1
642 644Right-handed 310
Helix 12
12
1
645 667Right-handed alpha
Helix 13
13
1
668 671Right-handed 310
Helix 14
14
1
676 678Right-handed 310
Helix 15
15
1
679 700Right-handed alpha
Helix 16
16
1
705 726Right-handed alpha
Helix 17
17
1
727 729Right-handed 310
Helix 18
18
1
730 740Right-handed alpha
Helix 19
19
1
747 755Right-handed alpha
Helix 20
20
1
761 786Right-handed alpha
Helix 21
21
1
793 798Right-handed 310
Helix 22
22
2
411 447Right-handed alpha
Helix 23
23
2
462 482Right-handed alpha
Helix 24
24
2
484 525Right-handed alpha
Helix 25
25
2
540 568Right-handed alpha
Helix 26
26
2
571 583Right-handed alpha
Helix 27
27
2
585 605Right-handed alpha
Helix 28
28
2
608 614Right-handed alpha
Helix 29
29
2
617 622Right-handed 310
Helix 30
30
2
624 641Right-handed alpha
Helix 31
31
2
645 666Right-handed alpha
Helix 32
32
2
667 671Right-handed 310
Helix 33
33
2
681 700Right-handed alpha
Helix 34
34
2
705 726Right-handed alpha
Helix 35
35
2
730 742Right-handed alpha
Helix 36
36
2
747 756Right-handed alpha
Helix 37
37
2
761 781Right-handed alpha
Helix 38
38
2
793 798Right-handed 310
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There are 2 sheets in PDB entry 2FJI. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
453 454first strand
Strand 2
1
460 461anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
453 454first strand
Strand 2
2
460 461anti-parallel
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