Analysis of interatomic Contacts of Structural Units in PDB entry:
2FJR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FJR entry

There are 2 chains in PDB entry 2FJR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4ASN 192
B
 ASP 4ASN 192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2FJR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 22Right-handed alpha
Helix 2
2
A
25 33Right-handed alpha
Helix 3
3
A
36 46Right-handed alpha
Helix 4
4
A
50 62Right-handed alpha
Helix 5
5
A
64 71Right-handed alpha
Helix 6
6
A
107 111Right-handed 310
Helix 7
7
B
9 22Right-handed alpha
Helix 8
8
B
26 31Right-handed alpha
Helix 9
9
B
36 46Right-handed alpha
Helix 10
10
B
50 62Right-handed alpha
Helix 11
11
B
64 70Right-handed alpha
Helix 12
12
B
107 111Right-handed 310
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There are 2 sheets in PDB entry 2FJR. Click on sheet of interest to get list of strands forming it: A, B,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 105first strand
Strand 2
A
87 94anti-parallel
Strand 3
A
118 123parallel
Strand 4
A
126 131anti-parallel
Strand 5
A
179 190anti-parallel
Strand 6
B
179 190anti-parallel
Strand 7
B
126 131anti-parallel
Strand 8
B
118 123anti-parallel
Strand 9
B
87 94parallel
Strand 10
B
97 105anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 174first strand
Strand 2
A
161 165anti-parallel
Strand 3
A
148 157anti-parallel
Strand 4
A
139 145anti-parallel
Strand 5
A
179 190anti-parallel
Strand 6
B
179 190anti-parallel
Strand 7
B
139 145anti-parallel
Strand 8
B
148 157anti-parallel
Strand 9
B
161 165anti-parallel
Strand 10
B
171 174anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il