Analysis of interatomic Contacts of Structural Units in PDB entry:
2FKP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FKP entry

There are 4 chains in PDB entry 2FKP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 6ALA 375
B
 ARG 6ALA 375
C
 ARG 6ALA 375
D
 ARG 6ALA 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 2FKP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
66 77Right-handed alpha
Helix 2
2
A
77 83Right-handed alpha
Helix 3
3
A
89 96Right-handed alpha
Helix 4
4
A
103 123Right-handed alpha
Helix 5
5
A
125 131Right-handed alpha
Helix 6
6
A
148 162Right-handed alpha
Helix 7
7
A
176 187Right-handed alpha
Helix 8
8
A
201 203Right-handed 310
Helix 9
9
A
204 210Right-handed alpha
Helix 10
10
A
211 215Right-handed 310
Helix 11
11
A
228 238Right-handed alpha
Helix 12
12
A
250 260Right-handed alpha
Helix 13
13
A
275 289Right-handed alpha
Helix 14
14
A
301 312Right-handed alpha
Helix 15
15
A
325 329Right-handed 310
Helix 16
16
A
359 366Right-handed alpha
Helix 17
17
B
66 77Right-handed alpha
Helix 18
18
B
77 83Right-handed alpha
Helix 19
19
B
89 96Right-handed alpha
Helix 20
20
B
103 123Right-handed alpha
Helix 21
21
B
125 131Right-handed alpha
Helix 22
22
B
148 162Right-handed alpha
Helix 23
23
B
176 187Right-handed alpha
Helix 24
24
B
201 203Right-handed 310
Helix 25
25
B
204 210Right-handed alpha
Helix 26
26
B
211 215Right-handed 310
Helix 27
27
B
228 238Right-handed alpha
Helix 28
28
B
250 260Right-handed alpha
Helix 29
29
B
275 289Right-handed alpha
Helix 30
30
B
301 313Right-handed alpha
Helix 31
31
B
325 329Right-handed 310
Helix 32
32
B
359 366Right-handed alpha
Helix 33
33
C
66 77Right-handed alpha
Helix 34
34
C
77 83Right-handed alpha
Helix 35
35
C
89 97Right-handed alpha
Helix 36
36
C
103 123Right-handed alpha
Helix 37
37
C
125 131Right-handed alpha
Helix 38
38
C
148 161Right-handed alpha
Helix 39
39
C
176 187Right-handed alpha
Helix 40
40
C
201 203Right-handed 310
Helix 41
41
C
204 210Right-handed alpha
Helix 42
42
C
211 215Right-handed 310
Helix 43
43
C
228 238Right-handed alpha
Helix 44
44
C
250 261Right-handed alpha
Helix 45
45
C
275 289Right-handed alpha
Helix 46
46
C
301 312Right-handed alpha
Helix 47
47
C
325 329Right-handed 310
Helix 48
48
C
359 366Right-handed alpha
Helix 49
49
D
66 77Right-handed alpha
Helix 50
50
D
77 83Right-handed alpha
Helix 51
51
D
89 97Right-handed alpha
Helix 52
52
D
103 123Right-handed alpha
Helix 53
53
D
125 131Right-handed alpha
Helix 54
54
D
148 161Right-handed alpha
Helix 55
55
D
176 187Right-handed alpha
Helix 56
56
D
201 203Right-handed 310
Helix 57
57
D
204 210Right-handed alpha
Helix 58
58
D
211 215Right-handed 310
Helix 59
59
D
228 238Right-handed alpha
Helix 60
60
D
250 261Right-handed alpha
Helix 61
61
D
275 289Right-handed alpha
Helix 62
62
D
301 312Right-handed alpha
Helix 63
63
D
325 329Right-handed 310
Helix 64
64
D
359 366Right-handed alpha
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There are 16 sheets in PDB entry 2FKP. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 9first strand
Strand 2
A
86 87anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 53first strand
Strand 2
A
35 45anti-parallel
Strand 3
A
12 21anti-parallel
Strand 4
A
367 374anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
345 347anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 143first strand
Strand 2
A
167 170parallel
Strand 3
A
192 195parallel
Strand 4
A
219 220parallel
Strand 5
A
242 244parallel
Strand 6
A
265 268parallel
Strand 7
A
293 295parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 9first strand
Strand 2
B
86 87anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 53first strand
Strand 2
B
35 45anti-parallel
Strand 3
B
12 21anti-parallel
Strand 4
B
367 374anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 138first strand
Strand 2
B
345 347anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 143first strand
Strand 2
B
167 170parallel
Strand 3
B
192 195parallel
Strand 4
B
219 220parallel
Strand 5
B
242 244parallel
Strand 6
B
265 268parallel
Strand 7
B
293 295parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 9first strand
Strand 2
C
86 87anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 53first strand
Strand 2
C
35 45anti-parallel
Strand 3
C
12 21anti-parallel
Strand 4
C
367 374anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
136 138first strand
Strand 2
C
345 347anti-parallel
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There are 7 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
141 143first strand
Strand 2
C
167 170parallel
Strand 3
C
192 195parallel
Strand 4
C
219 220parallel
Strand 5
C
242 244parallel
Strand 6
C
265 268parallel
Strand 7
C
293 295parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
8 9first strand
Strand 2
D
86 87anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 53first strand
Strand 2
D
35 45anti-parallel
Strand 3
D
12 21anti-parallel
Strand 4
D
367 374anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
136 138first strand
Strand 2
D
345 347anti-parallel
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There are 7 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
141 143first strand
Strand 2
D
167 170parallel
Strand 3
D
192 195parallel
Strand 4
D
219 220parallel
Strand 5
D
242 244parallel
Strand 6
D
265 268parallel
Strand 7
D
293 295parallel
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