Analysis of interatomic Contacts of Structural Units in PDB entry:
2FMO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FMO entry

There are 3 chains in PDB entry 2FMO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 22PRO 294
B
 GLN 14PRO 294
C
 GLN 22PRO 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 2FMO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 50Right-handed alpha
Helix 2
2
A
69 82Right-handed alpha
Helix 3
3
A
95 108Right-handed alpha
Helix 4
4
A
131 143Right-handed alpha
Helix 5
5
A
161 175Right-handed alpha
Helix 6
6
A
187 201Right-handed alpha
Helix 7
7
A
216 228Right-handed alpha
Helix 8
8
A
232 240Right-handed alpha
Helix 9
9
A
245 267Right-handed alpha
Helix 10
10
A
280 290Right-handed alpha
Helix 11
11
B
14 19Right-handed alpha
Helix 12
12
B
34 50Right-handed alpha
Helix 13
13
B
66 82Right-handed alpha
Helix 14
14
B
95 109Right-handed alpha
Helix 15
15
B
131 143Right-handed alpha
Helix 16
16
B
161 175Right-handed alpha
Helix 17
17
B
187 201Right-handed alpha
Helix 18
18
B
216 228Right-handed alpha
Helix 19
19
B
232 240Right-handed alpha
Helix 20
20
B
245 267Right-handed alpha
Helix 21
21
B
280 290Right-handed alpha
Helix 22
22
C
34 50Right-handed alpha
Helix 23
23
C
66 82Right-handed alpha
Helix 24
24
C
95 109Right-handed alpha
Helix 25
25
C
131 143Right-handed alpha
Helix 26
26
C
161 175Right-handed alpha
Helix 27
27
C
187 201Right-handed alpha
Helix 28
28
C
216 226Right-handed alpha
Helix 29
29
C
232 239Right-handed alpha
Helix 30
30
C
245 267Right-handed alpha
Helix 31
31
C
280 290Right-handed alpha
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There are 3 sheets in PDB entry 2FMO. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
179 182parallel
Strand 3
A
146 151parallel
Strand 4
A
113 116parallel
Strand 5
A
85 89parallel
Strand 6
A
55 58parallel
Strand 7
A
24 29parallel
Strand 8
A
271 275parallel
Strand 9
A
210 211parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 29first strand
Strand 2
B
55 58parallel
Strand 3
B
85 90parallel
Strand 4
B
113 117parallel
Strand 5
B
146 151parallel
Strand 6
B
179 184parallel
Strand 7
B
207 211parallel
Strand 8
B
271 275parallel
Strand 9
B
24 29parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 29first strand
Strand 2
C
55 58parallel
Strand 3
C
85 90parallel
Strand 4
C
113 117parallel
Strand 5
C
146 151parallel
Strand 6
C
179 184parallel
Strand 7
C
206 211parallel
Strand 8
C
271 275parallel
Strand 9
C
24 29parallel
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