Analysis of interatomic Contacts of Structural Units in PDB entry:
2FO5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2FO5 entry

There are 8 chains in PDB entry 2FO5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 3	TYR 226
B	ASP 3	TYR 226
C	ASP 3	TYR 226
D	ASP 3	TYR 226
E	LEU 300	LEU 301
F	LEU 300	LEU 301
G	LEU 300	LEU 301
H	LEU 300	LEU 301

There are 32 helices in PDB entry 2FO5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	27	46	Right-handed alpha
Helix 2	2	A	52	60	Right-handed alpha
Helix 3	3	A	65	69	Right-handed 310
Helix 4	4	A	71	82	Right-handed alpha
Helix 5	5	A	101	109	Right-handed alpha
Helix 6	6	A	125	136	Right-handed alpha
Helix 7	7	A	146	151	Right-handed alpha
Helix 8	8	A	211	215	Right-handed 310
Helix 9	9	B	27	46	Right-handed alpha
Helix 10	10	B	52	60	Right-handed alpha
Helix 11	11	B	65	69	Right-handed 310
Helix 12	12	B	71	82	Right-handed alpha
Helix 13	13	B	101	106	Right-handed alpha
Helix 14	14	B	125	136	Right-handed alpha
Helix 15	15	B	146	151	Right-handed alpha
Helix 16	16	B	211	215	Right-handed 310
Helix 17	17	C	27	46	Right-handed alpha
Helix 18	18	C	52	60	Right-handed alpha
Helix 19	19	C	65	69	Right-handed 310
Helix 20	20	C	71	82	Right-handed alpha
Helix 21	21	C	101	109	Right-handed alpha
Helix 22	22	C	125	136	Right-handed alpha
Helix 23	23	C	146	151	Right-handed alpha
Helix 24	24	C	211	215	Right-handed 310
Helix 25	25	D	27	46	Right-handed alpha
Helix 26	26	D	52	60	Right-handed alpha
Helix 27	27	D	65	69	Right-handed 310
Helix 28	28	D	71	82	Right-handed alpha
Helix 29	29	D	101	106	Right-handed alpha
Helix 30	30	D	125	136	Right-handed alpha
Helix 31	31	D	146	151	Right-handed alpha
Helix 32	32	D	211	215	Right-handed 310

There are 16 sheets in PDB entry 2FO5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	9	first strand
Strand 2	A	167	176	anti-parallel
Strand 3	A	138	142	anti-parallel

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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	9	first strand
Strand 2	A	167	176	anti-parallel
Strand 3	A	182	187	anti-parallel
Strand 4	A	199	203	anti-parallel
Strand 5	A	156	157	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	86	first strand
Strand 2	A	112	113	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	117	120	first strand
Strand 2	A	220	223	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	9	first strand
Strand 2	B	167	176	anti-parallel
Strand 3	B	138	142	anti-parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	9	first strand
Strand 2	B	167	176	anti-parallel
Strand 3	B	182	187	anti-parallel
Strand 4	B	199	203	anti-parallel
Strand 5	B	156	157	parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	86	first strand
Strand 2	B	112	113	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	120	first strand
Strand 2	B	220	223	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	9	first strand
Strand 2	C	167	176	anti-parallel
Strand 3	C	138	142	anti-parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	9	first strand
Strand 2	C	167	176	anti-parallel
Strand 3	C	182	187	anti-parallel
Strand 4	C	199	203	anti-parallel
Strand 5	C	156	157	parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	86	first strand
Strand 2	C	112	113	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	117	120	first strand
Strand 2	C	220	223	anti-parallel

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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	8	9	first strand
Strand 2	D	167	176	anti-parallel
Strand 3	D	138	142	anti-parallel

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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	8	9	first strand
Strand 2	D	167	176	anti-parallel
Strand 3	D	182	187	anti-parallel
Strand 4	D	199	203	anti-parallel
Strand 5	D	156	157	parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	86	first strand
Strand 2	D	112	113	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	120	first strand
Strand 2	D	220	223	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2FO5

Analysis of interatomic Contacts of Structural Units in PDB entry:
2FO5