Analysis of interatomic Contacts of Structural Units in PDB entry:
2FPE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FPE entry

There are 8 chains in PDB entry 2FPE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1LYS 60
B
 GLY -1LYS 60
C
 SER 0LYS 60
D
 GLY -1VAL 58
E
 GLU 1VAL 58
F
 SER 0THR 59
G
 GLU 1LYS 60
H
 GLU 1LYS 60
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 2FPE

There are 8 sheets in PDB entry 2FPE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 51first strand
Strand 2
A
36 41anti-parallel
Strand 3
A
25 31anti-parallel
Strand 4
A
4 6anti-parallel
Strand 5
A
55 57anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 51first strand
Strand 2
B
36 41anti-parallel
Strand 3
B
25 31anti-parallel
Strand 4
B
4 6anti-parallel
Strand 5
B
55 57anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 51first strand
Strand 2
C
36 41anti-parallel
Strand 3
C
25 31anti-parallel
Strand 4
C
4 6anti-parallel
Strand 5
C
55 57anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 51first strand
Strand 2
D
36 41anti-parallel
Strand 3
D
25 31anti-parallel
Strand 4
D
4 6anti-parallel
Strand 5
D
55 57anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
47 51first strand
Strand 2
E
36 41anti-parallel
Strand 3
E
25 31anti-parallel
Strand 4
E
4 6anti-parallel
Strand 5
E
55 57anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
47 51first strand
Strand 2
F
36 41anti-parallel
Strand 3
F
25 31anti-parallel
Strand 4
F
4 6anti-parallel
Strand 5
F
55 57anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
47 51first strand
Strand 2
G
36 41anti-parallel
Strand 3
G
25 31anti-parallel
Strand 4
G
4 6anti-parallel
Strand 5
G
55 57anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
47 51first strand
Strand 2
H
36 41anti-parallel
Strand 3
H
25 31anti-parallel
Strand 4
H
4 6anti-parallel
Strand 5
H
55 57anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il