Analysis of interatomic Contacts of Structural Units in PDB entry:
2FPQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FPQ entry

There is 1 chain in PDB entry 2FPQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU -1LEU 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2FPQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
79 98Right-handed alpha
Helix 2
2
A
100 113Right-handed alpha
Helix 3
3
A
180 184Right-handed 310
Helix 4
4
A
222 239Right-handed alpha
Helix 5
5
A
255 259Right-handed 310
Helix 6
6
A
267 274Right-handed alpha
Helix 7
7
A
275 281Right-handed 310
Helix 8
8
A
282 307Right-handed alpha
Helix 9
9
A
312 317Right-handed 310
Helix 10
10
A
318 330Right-handed alpha
Helix 11
11
A
343 356Right-handed alpha
Helix 12
12
A
359 367Right-handed alpha
Helix 13
13
A
402 406Right-handed 310
Helix 14
14
A
410 414Right-handed 310
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There are 6 sheets in PDB entry 2FPQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 152first strand
Strand 2
A
136 142anti-parallel
Strand 3
A
19 23anti-parallel
Strand 4
A
34 40anti-parallel
Strand 5
A
43 46anti-parallel
Strand 6
A
156 159parallel
Strand 7
A
190 193parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 128first strand
Strand 2
A
309 311parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
383 384anti-parallel
Strand 3
A
422 423anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 203first strand
Strand 2
A
218 220anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 249first strand
Strand 2
A
265 266anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 334first strand
Strand 2
A
340 341anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il