Analysis of interatomic Contacts of Structural Units in PDB entry:
2FPZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FPZ entry

There are 4 chains in PDB entry 2FPZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 16LYS 244
B
 ILE 16LYS 244
C
 ILE 16LYS 244
D
 ILE 16LYS 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2FPZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
55 60Right-handed alpha
Helix 2
2
A
60 62Right-handed 310
Helix 3
3
A
164 173Right-handed alpha
Helix 4
4
A
234 239Right-handed alpha
Helix 5
5
B
55 59Right-handed 310
Helix 6
6
B
60 62Right-handed 310
Helix 7
7
B
164 173Right-handed alpha
Helix 8
8
B
234 242Right-handed alpha
Helix 9
9
C
55 59Right-handed 310
Helix 10
10
C
60 62Right-handed 310
Helix 11
11
C
164 173Right-handed alpha
Helix 12
12
C
234 239Right-handed alpha
Helix 13
13
D
55 60Right-handed alpha
Helix 14
14
D
60 62Right-handed 310
Helix 15
15
D
164 173Right-handed alpha
Helix 16
16
D
234 242Right-handed alpha
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There are 8 sheets in PDB entry 2FPZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
156 163anti-parallel
Strand 3
A
180 183anti-parallel
Strand 4
A
226 230anti-parallel
Strand 5
A
206 215anti-parallel
Strand 6
A
198 203anti-parallel
Strand 7
A
135 140anti-parallel
Strand 8
A
156 163anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
39 48anti-parallel
Strand 3
A
51 54anti-parallel
Strand 4
A
104 108anti-parallel
Strand 5
A
83 90anti-parallel
Strand 6
A
64 67anti-parallel
Strand 7
A
30 35anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 21first strand
Strand 2
B
156 160anti-parallel
Strand 3
B
136 140anti-parallel
Strand 4
B
198 203anti-parallel
Strand 5
B
206 215anti-parallel
Strand 6
B
226 230anti-parallel
Strand 7
B
180 183anti-parallel
Strand 8
B
162 163anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 35first strand
Strand 2
B
39 48anti-parallel
Strand 3
B
51 54anti-parallel
Strand 4
B
104 108anti-parallel
Strand 5
B
83 90anti-parallel
Strand 6
B
64 67anti-parallel
Strand 7
B
30 35anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
20 21first strand
Strand 2
C
156 163anti-parallel
Strand 3
C
180 183anti-parallel
Strand 4
C
226 230anti-parallel
Strand 5
C
207 215anti-parallel
Strand 6
C
198 202anti-parallel
Strand 7
C
135 140anti-parallel
Strand 8
C
156 163anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 35first strand
Strand 2
C
39 48anti-parallel
Strand 3
C
51 54anti-parallel
Strand 4
C
104 108anti-parallel
Strand 5
C
83 90anti-parallel
Strand 6
C
64 67anti-parallel
Strand 7
C
30 35anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
20 21first strand
Strand 2
D
156 160anti-parallel
Strand 3
D
136 140anti-parallel
Strand 4
D
198 203anti-parallel
Strand 5
D
206 215anti-parallel
Strand 6
D
226 230anti-parallel
Strand 7
D
180 183anti-parallel
Strand 8
D
162 163anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 35first strand
Strand 2
D
39 48anti-parallel
Strand 3
D
51 54anti-parallel
Strand 4
D
104 108anti-parallel
Strand 5
D
83 90anti-parallel
Strand 6
D
64 67anti-parallel
Strand 7
D
30 35anti-parallel
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