Analysis of interatomic Contacts of Structural Units in PDB entry:
2FQY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FQY entry

There is 1 chain in PDB entry 2FQY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 18ASN 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2FQY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 51Right-handed alpha
Helix 2
2
A
62 64Right-handed 310
Helix 3
3
A
65 76Right-handed alpha
Helix 4
4
A
88 99Right-handed alpha
Helix 5
5
A
123 142Right-handed alpha
Helix 6
6
A
159 173Right-handed alpha
Helix 7
7
A
188 202Right-handed alpha
Helix 8
8
A
211 228Right-handed alpha
Helix 9
9
A
241 246Right-handed 310
Helix 10
10
A
261 276Right-handed alpha
Helix 11
11
A
303 319Right-handed alpha
Helix 12
12
A
328 332Right-handed 310
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There are 2 sheets in PDB entry 2FQY. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 59first strand
Strand 2
A
21 26parallel
Strand 3
A
80 84parallel
Strand 4
A
104 107parallel
Strand 5
A
117 122parallel
Strand 6
A
283 286parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 182first strand
Strand 2
A
146 151parallel
Strand 3
A
206 210parallel
Strand 4
A
233 238parallel
Strand 5
A
254 260parallel
Strand 6
A
293 294anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il