Analysis of interatomic Contacts of Structural Units in PDB entry:
2FR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FR8 entry

There are 3 chains in PDB entry 2FR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 379
B
 MET 1VAL 375
C
 SER 30ASN 203
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 2FR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 30Right-handed alpha
Helix 2
2
A
46 54Right-handed alpha
Helix 3
3
A
60 67Right-handed alpha
Helix 4
4
A
79 83Right-handed 310
Helix 5
5
A
86 90Right-handed 310
Helix 6
6
A
101 104Right-handed 310
Helix 7
7
A
105 115Right-handed alpha
Helix 8
8
A
123 125Right-handed 310
Helix 9
9
A
135 156Right-handed alpha
Helix 10
10
A
181 195Right-handed alpha
Helix 11
11
A
206 214Right-handed alpha
Helix 12
12
A
248 256Right-handed alpha
Helix 13
13
A
277 283Right-handed alpha
Helix 14
14
A
294 298Right-handed 310
Helix 15
15
A
323 326Right-handed 310
Helix 16
16
A
327 344Right-handed alpha
Helix 17
17
A
345 347Right-handed 310
Helix 18
18
A
360 367Right-handed alpha
Helix 19
19
B
19 28Right-handed alpha
Helix 20
20
B
40 44Right-handed 310
Helix 21
21
B
46 52Right-handed alpha
Helix 22
22
B
61 66Right-handed alpha
Helix 23
23
B
79 83Right-handed 310
Helix 24
24
B
86 90Right-handed 310
Helix 25
25
B
105 115Right-handed alpha
Helix 26
26
B
123 125Right-handed 310
Helix 27
27
B
129 134Right-handed 310
Helix 28
28
B
135 156Right-handed alpha
Helix 29
29
B
181 195Right-handed alpha
Helix 30
30
B
206 213Right-handed alpha
Helix 31
31
B
247 258Right-handed alpha
Helix 32
32
B
277 283Right-handed alpha
Helix 33
33
B
294 298Right-handed 310
Helix 34
34
B
323 326Right-handed 310
Helix 35
35
B
327 344Right-handed alpha
Helix 36
36
B
345 347Right-handed 310
Helix 37
37
B
360 365Right-handed alpha
Helix 38
38
C
35 45Right-handed alpha
Helix 39
39
C
54 60Right-handed alpha
Helix 40
40
C
62 75Right-handed alpha
Helix 41
41
C
93 102Right-handed alpha
Helix 42
42
C
105 107Right-handed 310
Helix 43
43
C
112 116Right-handed alpha
Helix 44
44
C
131 135Right-handed 310
Helix 45
45
C
136 141Right-handed alpha
Helix 46
46
C
176 181Right-handed 310
Helix 47
47
C
190 202Right-handed alpha
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There are 6 sheets in PDB entry 2FR8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
32 36parallel
Strand 3
A
2 5parallel
Strand 4
A
70 75parallel
Strand 5
A
95 99parallel
Strand 6
A
118 121parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 218first strand
Strand 2
A
197 201parallel
Strand 3
A
174 178parallel
Strand 4
A
260 263parallel
Strand 5
A
288 292parallel
Strand 6
A
315 319parallel
Strand 7
A
308 312anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 58first strand
Strand 2
B
32 36parallel
Strand 3
B
2 5parallel
Strand 4
B
70 75parallel
Strand 5
B
95 99parallel
Strand 6
B
118 121parallel
Strand 7
B
367 369anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 165first strand
Strand 2
B
168 170anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 218first strand
Strand 2
B
197 201parallel
Strand 3
B
174 178parallel
Strand 4
B
260 263parallel
Strand 5
B
289 292parallel
Strand 6
B
315 318parallel
Strand 7
B
309 312anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
109 111first strand
Strand 2
C
79 84parallel
Strand 3
C
48 53parallel
Strand 4
C
124 128parallel
Strand 5
C
159 164parallel
Strand 6
C
184 188parallel
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