Analysis of interatomic Contacts of Structural Units in PDB entry:
2FSH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FSH entry

There are 2 chains in PDB entry 2FSH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 13GLU 836
B
ARG 13MET 833
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 2FSH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
14 31Right-handed alpha
Helix 2
2
A
31 38Right-handed alpha
Helix 3
3
A
39 56Right-handed alpha
Helix 4
4
A
59 62Right-handed 310
Helix 5
5
A
63 79Right-handed alpha
Helix 6
6
A
84 94Right-handed alpha
Helix 7
7
A
107 121Right-handed alpha
Helix 8
8
A
132 150Right-handed alpha
Helix 9
9
A
162 172Right-handed alpha
Helix 10
10
A
179 190Right-handed alpha
Helix 11
11
A
194 198Right-handed 310
Helix 12
12
A
210 215Right-handed alpha
Helix 13
13
A
377 382Right-handed alpha
Helix 14
14
A
397 406Right-handed alpha
Helix 15
15
A
430 448Right-handed alpha
Helix 16
16
A
458 472Right-handed alpha
Helix 17
17
A
483 494Right-handed alpha
Helix 18
18
A
519 526Right-handed alpha
Helix 19
19
A
531 551Right-handed alpha
Helix 20
20
A
564 573Right-handed alpha
Helix 21
21
A
574 575Right-handed 310
Helix 22
22
A
576 580Right-handed 310
Helix 23
23
A
592 597Right-handed 310
Helix 24
24
A
600 605Right-handed alpha
Helix 25
25
A
606 611Right-handed 310
Helix 26
26
A
621 668Right-handed alpha
Helix 27
27
A
672 690Right-handed alpha
Helix 28
28
A
697 701Right-handed 310
Helix 29
29
A
702 715Right-handed alpha
Helix 30
30
A
719 727Right-handed alpha
Helix 31
31
A
731 755Right-handed alpha
Helix 32
32
A
755 788Right-handed alpha
Helix 33
33
A
801 829Right-handed alpha
Helix 34
34
B
13 31Right-handed alpha
Helix 35
35
B
31 38Right-handed alpha
Helix 36
36
B
39 56Right-handed alpha
Helix 37
37
B
59 62Right-handed 310
Helix 38
38
B
63 80Right-handed alpha
Helix 39
39
B
84 94Right-handed alpha
Helix 40
40
B
107 112Right-handed alpha
Helix 41
41
B
112 121Right-handed alpha
Helix 42
42
B
132 150Right-handed alpha
Helix 43
43
B
162 172Right-handed alpha
Helix 44
44
B
179 190Right-handed alpha
Helix 45
45
B
194 198Right-handed 310
Helix 46
46
B
210 216Right-handed alpha
Helix 47
47
B
281 287Right-handed alpha
Helix 48
48
B
303 313Right-handed alpha
Helix 49
49
B
377 382Right-handed alpha
Helix 50
50
B
397 406Right-handed alpha
Helix 51
51
B
430 448Right-handed alpha
Helix 52
52
B
458 472Right-handed alpha
Helix 53
53
B
483 493Right-handed alpha
Helix 54
54
B
522 526Right-handed 310
Helix 55
55
B
530 551Right-handed alpha
Helix 56
56
B
564 573Right-handed alpha
Helix 57
57
B
574 575Right-handed 310
Helix 58
58
B
576 580Right-handed 310
Helix 59
59
B
592 597Right-handed 310
Helix 60
60
B
600 605Right-handed alpha
Helix 61
61
B
620 668Right-handed alpha
Helix 62
62
B
672 690Right-handed alpha
Helix 63
63
B
697 701Right-handed 310
Helix 64
64
B
702 715Right-handed alpha
Helix 65
65
B
720 727Right-handed alpha
Helix 66
66
B
731 755Right-handed alpha
Helix 67
67
B
755 789Right-handed alpha
Helix 68
68
B
798 829Right-handed alpha
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There are 8 sheets in PDB entry 2FSH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
154 156first strand
Strand 2
A
174 178parallel
Strand 3
A
127 130parallel
Strand 4
A
205 208parallel
Strand 5
A
386 391parallel
Strand 6
A
98 101parallel
Strand 7
A
408 411parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
222 227first strand
Strand 2
A
370 376anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
421 422first strand
Strand 2
A
582 589parallel
Strand 3
A
426 428parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
421 422first strand
Strand 2
A
582 589parallel
Strand 3
A
554 558parallel
Strand 4
A
452 456parallel
Strand 5
A
500 504parallel
Strand 6
A
477 478parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
154 156first strand
Strand 2
B
174 178parallel
Strand 3
B
127 130parallel
Strand 4
B
205 208parallel
Strand 5
B
386 391parallel
Strand 6
B
98 101parallel
Strand 7
B
408 411parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
222 227first strand
Strand 2
B
370 376anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
421 422first strand
Strand 2
B
582 589parallel
Strand 3
B
426 428parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
421 422first strand
Strand 2
B
582 589parallel
Strand 3
B
554 558parallel
Strand 4
B
452 456parallel
Strand 5
B
500 504parallel
Strand 6
B
477 478parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il