Analysis of interatomic Contacts of Structural Units in PDB entry:
2FSJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FSJ entry

There is 1 chain in PDB entry 2FSJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2FSJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 20Right-handed 310
Helix 2
2
A
59 61Right-handed 310
Helix 3
3
A
80 92Right-handed alpha
Helix 4
4
A
109 111Right-handed 310
Helix 5
5
A
112 125Right-handed alpha
Helix 6
6
A
134 136Right-handed 310
Helix 7
7
A
152 162Right-handed alpha
Helix 8
8
A
195 199Right-handed 310
Helix 9
9
A
205 222Right-handed alpha
Helix 10
10
A
226 234Right-handed alpha
Helix 11
11
A
247 271Right-handed alpha
Helix 12
12
A
272 275Right-handed 310
Helix 13
13
A
286 291Right-handed alpha
Helix 14
14
A
292 298Right-handed 310
Helix 15
15
A
312 324Right-handed alpha
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There are 4 sheets in PDB entry 2FSJ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 26first strand
Strand 2
A
12 16anti-parallel
Strand 3
A
2 8anti-parallel
Strand 4
A
100 108parallel
Strand 5
A
138 150parallel
Strand 6
A
127 132anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
54 57anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 202first strand
Strand 2
A
182 188anti-parallel
Strand 3
A
171 177anti-parallel
Strand 4
A
277 283parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 240first strand
Strand 2
A
243 245anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il