Analysis of interatomic Contacts of Structural Units in PDB entry:
2FU5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FU5 entry

There are 4 chains in PDB entry 2FU5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 7GLU 123
B
 GLN 7GLU 123
C
 LYS 3LYS 178
D
 LYS 3LYS 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 2FU5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
73 77Right-handed 310
Helix 2
2
A
118 120Right-handed 310
Helix 3
3
B
73 77Right-handed 310
Helix 4
4
B
118 120Right-handed 310
Helix 5
5
C
36 42Right-handed alpha
Helix 6
6
C
92 110Right-handed alpha
Helix 7
7
C
132 143Right-handed alpha
Helix 8
8
C
157 177Right-handed alpha
Helix 9
9
D
35 42Right-handed alpha
Helix 10
10
D
74 79Right-handed alpha
Helix 11
11
D
92 110Right-handed alpha
Helix 12
12
D
132 144Right-handed alpha
Helix 13
13
D
157 178Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 2FU5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 31first strand
Strand 2
A
20 22anti-parallel
Strand 3
A
121 123anti-parallel
Back to list of sheets
Back to top of page

There are 12 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 39first strand
Strand 2
A
68 71anti-parallel
Strand 3
A
113 116anti-parallel
Strand 4
A
103 106anti-parallel
Strand 5
A
89 93anti-parallel
Strand 6
A
80 83anti-parallel
Strand 7
D
43 52anti-parallel
Strand 8
D
55 64anti-parallel
Strand 9
D
7 14parallel
Strand 10
D
83 89parallel
Strand 11
D
115 121parallel
Strand 12
D
146 150parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 46first strand
Strand 2
A
62 65anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
20 22anti-parallel
Strand 3
B
121 123anti-parallel
Back to list of sheets
Back to top of page

There are 12 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 39first strand
Strand 2
B
68 71anti-parallel
Strand 3
B
113 116anti-parallel
Strand 4
B
103 106anti-parallel
Strand 5
B
89 93anti-parallel
Strand 6
B
80 83anti-parallel
Strand 7
C
43 52anti-parallel
Strand 8
C
55 63anti-parallel
Strand 9
C
7 14parallel
Strand 10
C
83 89parallel
Strand 11
C
115 121parallel
Strand 12
C
146 149parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 46first strand
Strand 2
B
62 65anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il