Analysis of interatomic Contacts of Structural Units in PDB entry:
2FVZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FVZ entry

There are 4 chains in PDB entry 2FVZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 16LEU 277
B
 TRP 16LEU 277
C
 TRP 16LEU 277
D
 TRP 16LEU 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 2FVZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 39Right-handed alpha
Helix 2
2
A
55 73Right-handed alpha
Helix 3
3
A
105 111Right-handed alpha
Helix 4
4
A
164 167Right-handed 310
Helix 5
5
A
179 196Right-handed alpha
Helix 6
6
A
206 216Right-handed alpha
Helix 7
7
A
228 231Right-handed 310
Helix 8
8
A
232 242Right-handed alpha
Helix 9
9
A
255 258Right-handed 310
Helix 10
10
A
266 276Right-handed alpha
Helix 11
11
B
16 38Right-handed alpha
Helix 12
12
B
55 73Right-handed alpha
Helix 13
13
B
105 112Right-handed alpha
Helix 14
14
B
164 167Right-handed 310
Helix 15
15
B
179 196Right-handed alpha
Helix 16
16
B
206 217Right-handed alpha
Helix 17
17
B
229 241Right-handed alpha
Helix 18
18
B
266 276Right-handed alpha
Helix 19
19
C
16 39Right-handed alpha
Helix 20
20
C
55 73Right-handed alpha
Helix 21
21
C
105 112Right-handed alpha
Helix 22
22
C
164 167Right-handed 310
Helix 23
23
C
181 196Right-handed alpha
Helix 24
24
C
206 216Right-handed alpha
Helix 25
25
C
228 231Right-handed 310
Helix 26
26
C
232 242Right-handed alpha
Helix 27
27
C
255 258Right-handed 310
Helix 28
28
C
266 276Right-handed alpha
Helix 29
29
D
16 39Right-handed alpha
Helix 30
30
D
55 73Right-handed alpha
Helix 31
31
D
105 112Right-handed alpha
Helix 32
32
D
164 167Right-handed 310
Helix 33
33
D
180 196Right-handed alpha
Helix 34
34
D
206 217Right-handed alpha
Helix 35
35
D
228 231Right-handed 310
Helix 36
36
D
232 243Right-handed alpha
Helix 37
37
D
255 258Right-handed 310
Helix 38
38
D
266 275Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 2FVZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 78first strand
Strand 2
A
97 104parallel
Strand 3
A
117 124anti-parallel
Strand 4
A
127 135anti-parallel
Strand 5
A
140 145anti-parallel
Strand 6
A
150 152anti-parallel
Strand 7
A
155 156anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 202first strand
Strand 2
A
169 171parallel
Strand 3
A
221 225parallel
Strand 4
A
260 264anti-parallel
Strand 5
A
245 247anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 80first strand
Strand 2
B
97 104parallel
Strand 3
B
117 124anti-parallel
Strand 4
B
127 135anti-parallel
Strand 5
B
140 145anti-parallel
Strand 6
B
150 152anti-parallel
Strand 7
B
155 156anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 202first strand
Strand 2
B
169 171parallel
Strand 3
B
221 225parallel
Strand 4
B
260 264anti-parallel
Strand 5
B
245 247anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 79first strand
Strand 2
C
97 104parallel
Strand 3
C
117 124anti-parallel
Strand 4
C
127 135anti-parallel
Strand 5
C
140 145anti-parallel
Strand 6
C
149 152anti-parallel
Strand 7
C
155 156anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
200 202first strand
Strand 2
C
169 171parallel
Strand 3
C
221 225parallel
Strand 4
C
260 264anti-parallel
Strand 5
C
245 247anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 80first strand
Strand 2
D
97 104parallel
Strand 3
D
117 124anti-parallel
Strand 4
D
127 135anti-parallel
Strand 5
D
140 145anti-parallel
Strand 6
D
148 152anti-parallel
Strand 7
D
155 156anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
200 202first strand
Strand 2
D
169 171parallel
Strand 3
D
221 225parallel
Strand 4
D
260 264anti-parallel
Strand 5
D
245 247anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il