Analysis of interatomic Contacts of Structural Units in PDB entry:
2G04


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G04 entry

There are 6 chains in PDB entry 2G04 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 4TRP 359
B
 GLY 4TRP 359
C
 GLY 4TRP 359
D
 GLY 4TRP 359
E
 GLY 4TRP 359
F
 GLY 4TRP 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are103 helices in PDB entry 2G04. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 31Right-handed alpha
Helix 2
2
A
48 56Right-handed 310
Helix 3
3
A
72 77Right-handed alpha
Helix 4
4
A
89 94Right-handed alpha
Helix 5
5
A
97 105Right-handed alpha
Helix 6
6
A
121 125Right-handed 310
Helix 7
7
A
128 137Right-handed alpha
Helix 8
8
A
138 142Right-handed 310
Helix 9
9
A
162 181Right-handed alpha
Helix 10
10
A
190 198Right-handed alpha
Helix 11
11
A
198 208Right-handed alpha
Helix 12
12
A
243 254Right-handed alpha
Helix 13
13
A
266 268Right-handed 310
Helix 14
14
A
269 282Right-handed alpha
Helix 15
15
A
285 293Right-handed alpha
Helix 16
16
A
305 311Right-handed alpha
Helix 17
17
A
312 318Right-handed alpha
Helix 18
18
B
19 31Right-handed alpha
Helix 19
19
B
48 52Right-handed 310
Helix 20
20
B
72 77Right-handed alpha
Helix 21
21
B
89 94Right-handed alpha
Helix 22
22
B
97 105Right-handed alpha
Helix 23
23
B
121 125Right-handed 310
Helix 24
24
B
128 137Right-handed alpha
Helix 25
25
B
138 142Right-handed 310
Helix 26
26
B
162 181Right-handed alpha
Helix 27
27
B
190 198Right-handed alpha
Helix 28
28
B
198 208Right-handed alpha
Helix 29
29
B
243 254Right-handed alpha
Helix 30
30
B
266 268Right-handed 310
Helix 31
31
B
269 282Right-handed alpha
Helix 32
32
B
285 293Right-handed alpha
Helix 33
33
B
305 311Right-handed alpha
Helix 34
34
B
312 318Right-handed alpha
Helix 35
35
C
19 31Right-handed alpha
Helix 36
36
C
48 56Right-handed 310
Helix 37
37
C
72 77Right-handed alpha
Helix 38
38
C
89 94Right-handed alpha
Helix 39
39
C
97 105Right-handed alpha
Helix 40
40
C
121 125Right-handed 310
Helix 41
41
C
128 137Right-handed alpha
Helix 42
42
C
138 142Right-handed 310
Helix 43
43
C
162 181Right-handed alpha
Helix 44
44
C
190 198Right-handed alpha
Helix 45
45
C
198 208Right-handed alpha
Helix 46
46
C
243 254Right-handed alpha
Helix 47
47
C
266 268Right-handed 310
Helix 48
48
C
269 282Right-handed alpha
Helix 49
49
C
285 293Right-handed alpha
Helix 50
50
C
305 311Right-handed alpha
Helix 51
51
C
312 318Right-handed alpha
Helix 52
52
D
19 31Right-handed alpha
Helix 53
53
D
48 56Right-handed 310
Helix 54
54
D
72 77Right-handed alpha
Helix 55
55
D
89 94Right-handed alpha
Helix 56
56
D
97 105Right-handed alpha
Helix 57
57
D
121 125Right-handed 310
Helix 58
58
D
128 137Right-handed alpha
Helix 59
59
D
138 142Right-handed 310
Helix 60
60
D
162 181Right-handed alpha
Helix 61
61
D
190 198Right-handed alpha
Helix 62
62
D
198 208Right-handed alpha
Helix 63
63
D
243 254Right-handed alpha
Helix 64
64
D
266 268Right-handed 310
Helix 65
65
D
269 282Right-handed alpha
Helix 66
66
D
285 293Right-handed alpha
Helix 67
67
D
305 311Right-handed alpha
Helix 68
68
D
312 318Right-handed alpha
Helix 69
69
E
19 31Right-handed alpha
Helix 70
70
E
48 56Right-handed 310
Helix 71
71
E
69 71Right-handed 310
Helix 72
72
E
72 78Right-handed alpha
Helix 73
73
E
89 94Right-handed alpha
Helix 74
74
E
97 105Right-handed alpha
Helix 75
75
E
128 135Right-handed alpha
Helix 76
76
E
138 142Right-handed 310
Helix 77
77
E
162 181Right-handed alpha
Helix 78
78
E
190 198Right-handed alpha
Helix 79
79
E
198 208Right-handed alpha
Helix 80
80
E
243 253Right-handed alpha
Helix 81
81
E
257 261Right-handed 310
Helix 82
82
E
266 268Right-handed 310
Helix 83
83
E
269 282Right-handed alpha
Helix 84
84
E
285 293Right-handed alpha
Helix 85
85
E
305 311Right-handed alpha
Helix 86
86
E
312 318Right-handed alpha
Helix 87
87
F
19 31Right-handed alpha
Helix 88
88
F
48 52Right-handed 310
Helix 89
89
F
72 77Right-handed alpha
Helix 90
90
F
89 94Right-handed alpha
Helix 91
91
F
97 105Right-handed alpha
Helix 92
92
F
121 125Right-handed 310
Helix 93
93
F
128 137Right-handed alpha
Helix 94
94
F
138 142Right-handed 310
Helix 95
95
F
162 181Right-handed alpha
Helix 96
96
F
190 198Right-handed alpha
Helix 97
97
F
198 208Right-handed alpha
Helix 98
98
F
243 254Right-handed alpha
Helix 99
99
F
266 268Right-handed 310
Helix 100
100
F
269 282Right-handed alpha
Helix 101
101
F
285 293Right-handed alpha
Helix 102
102
F
305 311Right-handed alpha
Helix 103
103
F
312 318Right-handed alpha
Back to top of page

There are 18 sheets in PDB entry 2G04. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 62first strand
Strand 2
A
34 39parallel
Strand 3
A
11 14parallel
Strand 4
A
81 84parallel
Strand 5
A
109 114parallel
Strand 6
A
185 189parallel
Strand 7
B
335 336anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 230first strand
Strand 2
A
236 240anti-parallel
Strand 3
A
300 302anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 323first strand
Strand 2
A
328 330anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 336first strand
Strand 2
B
185 189anti-parallel
Strand 3
B
109 114parallel
Strand 4
B
81 84parallel
Strand 5
B
11 14parallel
Strand 6
B
34 39parallel
Strand 7
B
59 62parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 230first strand
Strand 2
B
236 239anti-parallel
Strand 3
B
300 302anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 323first strand
Strand 2
B
328 330anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 62first strand
Strand 2
C
34 39parallel
Strand 3
C
11 14parallel
Strand 4
C
81 84parallel
Strand 5
C
109 114parallel
Strand 6
C
185 189parallel
Strand 7
D
335 336anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
226 230first strand
Strand 2
C
236 240anti-parallel
Strand 3
C
300 302anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
321 323first strand
Strand 2
C
328 330anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
335 336first strand
Strand 2
D
185 189anti-parallel
Strand 3
D
109 114parallel
Strand 4
D
81 84parallel
Strand 5
D
11 14parallel
Strand 6
D
34 39parallel
Strand 7
D
59 62parallel
Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
227 230first strand
Strand 2
D
236 239anti-parallel
Strand 3
D
300 302anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
321 323first strand
Strand 2
D
328 330anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
34 37first strand
Strand 2
E
11 14parallel
Strand 3
E
81 84parallel
Strand 4
E
109 114parallel
Strand 5
E
185 189parallel
Strand 6
F
335 336anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
226 230first strand
Strand 2
E
236 240anti-parallel
Strand 3
E
300 302anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
321 323first strand
Strand 2
E
328 330anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
335 336first strand
Strand 2
F
185 189anti-parallel
Strand 3
F
109 114parallel
Strand 4
F
81 84parallel
Strand 5
F
11 14parallel
Strand 6
F
34 39parallel
Strand 7
F
59 62parallel
Back to list of sheets
Back to top of page

There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
226 230first strand
Strand 2
F
236 240anti-parallel
Strand 3
F
300 302anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
321 323first strand
Strand 2
F
328 330anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il