Analysis of interatomic Contacts of Structural Units in PDB entry:
2G05


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G05 entry

There is 1 chain in PDB entry 2G05 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 PRO 1ARG 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2G05. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
D
30 42Right-handed alpha
Helix 2
2
D
52 63Right-handed alpha
Helix 3
3
D
90 99Right-handed alpha
Helix 4
4
D
118 135Right-handed alpha
Helix 5
5
D
176 182Right-handed alpha
Helix 6
6
D
192 205Right-handed alpha
Helix 7
7
D
217 227Right-handed alpha
Helix 8
8
D
237 240Right-handed 310
Helix 9
9
D
278 287Right-handed alpha
Helix 10
10
D
314 324Right-handed alpha
Helix 11
11
D
337 341Right-handed 310
Helix 12
12
D
354 368Right-handed alpha
Helix 13
13
D
371 381Right-handed alpha
Helix 14
14
D
388 392Right-handed 310
Helix 15
15
D
395 399Right-handed 310
Helix 16
16
D
427 429Right-handed 310
Helix 17
17
D
431 443Right-handed alpha
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There are 5 sheets in PDB entry 2G05. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 20first strand
Strand 2
D
138 143parallel
Strand 3
D
108 112parallel
Strand 4
D
46 50parallel
Strand 5
D
85 89parallel
Strand 6
D
68 70parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
161 164first strand
Strand 2
D
299 302parallel
Strand 3
D
249 252parallel
Strand 4
D
186 189parallel
Strand 5
D
232 235parallel
Strand 6
D
210 213parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
255 262first strand
Strand 2
D
268 276anti-parallel
Strand 3
D
424 425parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
401 402first strand
Strand 2
D
405 406anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
408 410first strand
Strand 2
D
416 418anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il