Analysis of interatomic Contacts of Structural Units in PDB entry:
2G0W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G0W entry

There are 2 chains in PDB entry 2G0W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 10ARG 284
B
 HIS -1PRO 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 29 helices in PDB entry 2G0W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 21Right-handed 310
Helix 2
2
A
25 36Right-handed alpha
Helix 3
3
A
45 54Right-handed alpha
Helix 4
4
A
57 68Right-handed alpha
Helix 5
5
A
88 106Right-handed alpha
Helix 6
6
A
119 135Right-handed alpha
Helix 7
7
A
151 163Right-handed alpha
Helix 8
8
A
173 179Right-handed alpha
Helix 9
9
A
182 187Right-handed 310
Helix 10
10
A
190 192Right-handed 310
Helix 11
11
A
209 217Right-handed alpha
Helix 12
12
A
227 239Right-handed alpha
Helix 13
13
A
251 258Right-handed alpha
Helix 14
14
A
258 278Right-handed alpha
Helix 15
15
A
279 282Right-handed 310
Helix 16
16
B
17 21Right-handed 310
Helix 17
17
B
25 36Right-handed alpha
Helix 18
18
B
45 54Right-handed alpha
Helix 19
19
B
57 68Right-handed alpha
Helix 20
20
B
88 106Right-handed alpha
Helix 21
21
B
119 135Right-handed alpha
Helix 22
22
B
151 163Right-handed alpha
Helix 23
23
B
173 179Right-handed alpha
Helix 24
24
B
190 192Right-handed 310
Helix 25
25
B
209 217Right-handed alpha
Helix 26
26
B
227 239Right-handed alpha
Helix 27
27
B
251 258Right-handed alpha
Helix 28
28
B
258 278Right-handed alpha
Helix 29
29
B
279 282Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 2G0W. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 76first strand
Strand 2
A
40 44parallel
Strand 3
A
13 15parallel
Strand 4
A
245 247parallel
Strand 5
A
194 199parallel
Strand 6
A
167 172parallel
Strand 7
A
138 142parallel
Strand 8
A
109 112parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
0 2first strand
Strand 2
B
8 10anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 15first strand
Strand 2
B
40 44parallel
Strand 3
B
71 78parallel
Strand 4
B
109 112parallel
Strand 5
B
138 142parallel
Strand 6
B
167 172parallel
Strand 7
B
194 199parallel
Strand 8
B
244 247parallel
Strand 9
B
13 15parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il