Analysis of interatomic Contacts of Structural Units in PDB entry:
2G1F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G1F entry

There are 2 chains in PDB entry 2G1F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1MET 576
B
 ALA 1MET 576
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 2G1F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
85 97Right-handed alpha
Helix 2
2
A
127 137Right-handed alpha
Helix 3
3
A
138 142Right-handed 310
Helix 4
4
A
147 160Right-handed alpha
Helix 5
5
A
160 171Right-handed alpha
Helix 6
6
A
178 182Right-handed 310
Helix 7
7
A
183 194Right-handed alpha
Helix 8
8
A
216 222Right-handed alpha
Helix 9
9
A
236 241Right-handed alpha
Helix 10
10
A
242 244Right-handed 310
Helix 11
11
A
272 279Right-handed alpha
Helix 12
12
A
310 321Right-handed alpha
Helix 13
13
A
336 342Right-handed 310
Helix 14
14
A
343 348Right-handed alpha
Helix 15
15
A
367 381Right-handed alpha
Helix 16
16
A
383 390Right-handed alpha
Helix 17
17
A
391 397Right-handed alpha
Helix 18
18
A
400 405Right-handed alpha
Helix 19
19
A
405 415Right-handed alpha
Helix 20
20
A
420 431Right-handed alpha
Helix 21
21
A
433 439Right-handed alpha
Helix 22
22
A
445 462Right-handed alpha
Helix 23
23
A
470 480Right-handed alpha
Helix 24
24
A
492 497Right-handed alpha
Helix 25
25
A
516 521Right-handed alpha
Helix 26
26
A
526 538Right-handed alpha
Helix 27
27
A
564 569Right-handed alpha
Helix 28
28
B
85 97Right-handed alpha
Helix 29
29
B
127 137Right-handed alpha
Helix 30
30
B
138 142Right-handed 310
Helix 31
31
B
147 160Right-handed alpha
Helix 32
32
B
160 171Right-handed alpha
Helix 33
33
B
178 182Right-handed 310
Helix 34
34
B
183 194Right-handed alpha
Helix 35
35
B
216 222Right-handed alpha
Helix 36
36
B
236 241Right-handed alpha
Helix 37
37
B
242 244Right-handed 310
Helix 38
38
B
272 279Right-handed alpha
Helix 39
39
B
310 321Right-handed alpha
Helix 40
40
B
336 342Right-handed 310
Helix 41
41
B
343 348Right-handed alpha
Helix 42
42
B
367 381Right-handed alpha
Helix 43
43
B
383 390Right-handed alpha
Helix 44
44
B
391 397Right-handed alpha
Helix 45
45
B
400 405Right-handed alpha
Helix 46
46
B
405 415Right-handed alpha
Helix 47
47
B
420 430Right-handed alpha
Helix 48
48
B
433 439Right-handed alpha
Helix 49
49
B
445 462Right-handed alpha
Helix 50
50
B
470 480Right-handed alpha
Helix 51
51
B
492 497Right-handed alpha
Helix 52
52
B
516 521Right-handed alpha
Helix 53
53
B
526 538Right-handed alpha
Helix 54
54
B
564 569Right-handed alpha
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There are 4 sheets in PDB entry 2G1F. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 176first strand
Strand 2
A
198 199parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 304first strand
Strand 2
A
504 506parallel
Strand 3
A
544 550parallel
Strand 4
A
263 269parallel
Strand 5
A
573 575parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 176first strand
Strand 2
B
198 199parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
302 304first strand
Strand 2
B
504 506parallel
Strand 3
B
544 550parallel
Strand 4
B
263 269parallel
Strand 5
B
573 575parallel
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