Analysis of interatomic Contacts of Structural Units in PDB entry:
2G1T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G1T entry

There are 8 chains in PDB entry 2G1T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 232ILE 502
B
 PRO 230ILE 502
C
 TYR 232GLU 507
D
 GLY 226ILE 502
E
 GLU 105ALA 112
F
 GLU 104LYS 113
G
 GLU 105GLU 111
H
 GLU 104GLU 111
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 2G1T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
238 240Right-handed 310
Helix 2
2
A
263 265Right-handed 310
Helix 3
3
A
279 292Right-handed alpha
Helix 4
4
A
322 330Right-handed alpha
Helix 5
5
A
336 357Right-handed alpha
Helix 6
6
A
365 367Right-handed 310
Helix 7
7
A
373 375Right-handed 310
Helix 8
8
A
383 388Right-handed 310
Helix 9
9
A
389 393Right-handed 310
Helix 10
10
A
402 406Right-handed 310
Helix 11
11
A
407 414Right-handed alpha
Helix 12
12
A
417 434Right-handed alpha
Helix 13
13
A
444 446Right-handed 310
Helix 14
14
A
447 454Right-handed alpha
Helix 15
15
A
465 476Right-handed alpha
Helix 16
16
A
479 483Right-handed 310
Helix 17
17
A
485 502Right-handed alpha
Helix 18
18
B
238 240Right-handed 310
Helix 19
19
B
263 265Right-handed 310
Helix 20
20
B
279 292Right-handed alpha
Helix 21
21
B
322 330Right-handed alpha
Helix 22
22
B
336 357Right-handed alpha
Helix 23
23
B
365 367Right-handed 310
Helix 24
24
B
373 375Right-handed 310
Helix 25
25
B
383 388Right-handed 310
Helix 26
26
B
404 406Right-handed 310
Helix 27
27
B
407 414Right-handed alpha
Helix 28
28
B
417 434Right-handed alpha
Helix 29
29
B
444 446Right-handed 310
Helix 30
30
B
447 454Right-handed alpha
Helix 31
31
B
465 476Right-handed alpha
Helix 32
32
B
479 483Right-handed 310
Helix 33
33
B
485 502Right-handed alpha
Helix 34
34
C
238 240Right-handed 310
Helix 35
35
C
263 265Right-handed 310
Helix 36
36
C
279 292Right-handed alpha
Helix 37
37
C
322 330Right-handed alpha
Helix 38
38
C
336 357Right-handed alpha
Helix 39
39
C
365 367Right-handed 310
Helix 40
40
C
373 375Right-handed 310
Helix 41
41
C
383 388Right-handed 310
Helix 42
42
C
402 406Right-handed 310
Helix 43
43
C
407 414Right-handed alpha
Helix 44
44
C
417 434Right-handed alpha
Helix 45
45
C
444 446Right-handed 310
Helix 46
46
C
447 454Right-handed alpha
Helix 47
47
C
465 476Right-handed alpha
Helix 48
48
C
479 483Right-handed 310
Helix 49
49
C
485 507Right-handed alpha
Helix 50
50
D
238 240Right-handed 310
Helix 51
51
D
263 265Right-handed 310
Helix 52
52
D
279 292Right-handed alpha
Helix 53
53
D
322 330Right-handed alpha
Helix 54
54
D
336 357Right-handed alpha
Helix 55
55
D
365 367Right-handed 310
Helix 56
56
D
373 375Right-handed 310
Helix 57
57
D
383 388Right-handed 310
Helix 58
58
D
404 406Right-handed 310
Helix 59
59
D
407 414Right-handed alpha
Helix 60
60
D
417 434Right-handed alpha
Helix 61
61
D
444 446Right-handed 310
Helix 62
62
D
447 454Right-handed alpha
Helix 63
63
D
465 476Right-handed alpha
Helix 64
64
D
479 483Right-handed 310
Helix 65
65
D
485 501Right-handed alpha
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There are 12 sheets in PDB entry 2G1T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 237first strand
Strand 2
A
301 305parallel
Strand 3
A
312 316anti-parallel
Strand 4
A
266 273anti-parallel
Strand 5
A
254 261anti-parallel
Strand 6
A
242 250anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 371first strand
Strand 2
A
377 379anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 401first strand
Strand 2
E
108 110anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 250first strand
Strand 2
B
254 261anti-parallel
Strand 3
B
266 273anti-parallel
Strand 4
B
312 316anti-parallel
Strand 5
B
301 305anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
369 371first strand
Strand 2
B
377 379anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
399 402first strand
Strand 2
F
107 110anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
242 250first strand
Strand 2
C
254 261anti-parallel
Strand 3
C
266 273anti-parallel
Strand 4
C
312 316anti-parallel
Strand 5
C
301 305anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
369 371first strand
Strand 2
C
377 379anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
399 401first strand
Strand 2
G
108 110anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
242 250first strand
Strand 2
D
254 261anti-parallel
Strand 3
D
266 273anti-parallel
Strand 4
D
312 316anti-parallel
Strand 5
D
301 305anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
369 371first strand
Strand 2
D
377 379anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
399 402first strand
Strand 2
H
107 110anti-parallel
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