Analysis of interatomic Contacts of Structural Units in PDB entry:
2G29


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G29 entry

There is 1 chain in PDB entry 2G29 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 57ILE 441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2G29. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
71 73Right-handed 310
Helix 2
2
A
74 83Right-handed alpha
Helix 3
3
A
84 89Right-handed alpha
Helix 4
4
A
101 112Right-handed alpha
Helix 5
5
A
113 116Right-handed 310
Helix 6
6
A
125 134Right-handed alpha
Helix 7
7
A
161 167Right-handed 310
Helix 8
8
A
174 181Right-handed alpha
Helix 9
9
A
194 207Right-handed alpha
Helix 10
10
A
221 223Right-handed 310
Helix 11
11
A
224 231Right-handed alpha
Helix 12
12
A
242 250Right-handed alpha
Helix 13
13
A
260 262Right-handed 310
Helix 14
14
A
275 281Right-handed alpha
Helix 15
15
A
281 301Right-handed alpha
Helix 16
16
A
304 314Right-handed alpha
Helix 17
17
A
321 325Right-handed 310
Helix 18
18
A
327 330Right-handed 310
Helix 19
19
A
352 356Right-handed 310
Helix 20
20
A
360 374Right-handed alpha
Helix 21
21
A
382 391Right-handed alpha
Helix 22
22
A
392 403Right-handed alpha
Helix 23
23
A
406 410Right-handed 310
Helix 24
24
A
431 438Right-handed alpha
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There are 4 sheets in PDB entry 2G29. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 98first strand
Strand 2
A
65 68parallel
Strand 3
A
120 124parallel
Strand 4
A
269 274anti-parallel
Strand 5
A
144 149anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 219first strand
Strand 2
A
186 189parallel
Strand 3
A
236 240parallel
Strand 4
A
155 159anti-parallel
Strand 5
A
254 258anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 333first strand
Strand 2
A
342 343anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 420first strand
Strand 2
A
426 427anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il